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Reconstructing 3D Volumes of Biological Specimens Using a Model Based Iterative Approach

Published online by Cambridge University Press:  30 July 2021

Cheri M. Hampton ,
Sherman J. Kinser ,
Charles A. Bouman  and
Lawrence F. Drummy
Cheri M. Hampton
Affiliation:
UES, Inc., Dayton, Ohio, United States
Sherman J. Kinser
Affiliation:
High Performance Imaging, LLC, West Lafayette, Indiana, United States
Charles A. Bouman
Affiliation:
Purdue University, West Lafayette, Indiana, United States
Lawrence F. Drummy
Affiliation:
Air Force Research Laboratory, Wright-Patterson Air Force Base, Ohio, United States

Abstract

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Type
3D Structures: From Macromolecular Assemblies to Whole Cells (3DEM FIG)
Information
Microscopy and Microanalysis , Volume 27 , Supplement S1 , August 2021 , pp. 278 - 279
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Copyright
Copyright © The Author(s), 2021. Published by Cambridge University Press on behalf of the Microscopy Society of America

References

Venkatakrishnan, S. V., Drummy, L. F., Jackson, M., De Graef, M., Simmons, J., & Bouman, C. A. (2014). Model-based iterative reconstruction for bright-field electron tomography. IEEE Transactions on Computational Imaging, 1(1), 1-15.CrossRefGoogle Scholar
Farhadi, A., Ho, G. H., Sawyer, D. P., Bourdeau, R. W., & Shapiro, M. G. (2019). Ultrasound imaging of gene expression in mammalian cells. Science, 365(6460), 1469-1475.CrossRefGoogle ScholarPubMed
Bouman, C. A. and Sauer, K.. A Unified Approach to Statistical Tomography Using Coordinate Descent Optimization. IEEE Transactions on Image Processing, 5(3), March 1996, 480–492.Google Scholar
Wang, Xiao, Sabne, Amit, Sakdhnagool, Putt, Kisner, Sherman J, Bouman, Charles A, and Midkiff, Samuel P. Massively parallel 3D image reconstruction. In Proceedings of the International Conference for High Performance Computing, Networking, Storage and Analysis, SC ‘17. 2017.Google Scholar
Super-Voxel Model Based Iterative Reconstruction (SVMBIR) [Computer software]. https://github.com/cabouman/svmbirGoogle Scholar
Thibault, J. B., Sauer, K. D., Bouman, C. A., & Hsieh, J. (2007). A three-dimensional statistical approach to improved image quality for multislice helical CT. Medical physics, 34(11), 4526-4544.CrossRefGoogle ScholarPubMed