This commentary argues for strengthening the dialogue between the social and natural sciences as part of a more comprehensive sustainable approach to ecological farming practices that go beyond a focus on specific labels and certifications. It nuances the approach provided by Home et al. in their study of Swiss farms converting to organic agriculture, in emphasizing the need to deepen the study of such farming practices by including a broad vision of global value chains and a pragmatic approach to innovation and the different stakeholders involved. Ultimately, it calls for a more complex approach to eco-agriculture in its widest sense, that goes beyond dichotomies about conversion, certification and labeling. This would provide alternatives for researchers and other actors to move forward in theory and practice.