Shortfin mako shark, Isurus oxyrinchus, is listed as an endangered species with declining global population. Thus, studies regarding its biology and ecology are important to recommend fishery management and conservation measures. This study aimed to determine the diet composition and feeding habits of I. oxyrinchus in Ecuadorian waters. Samples were obtained from Santa Rosa fishing port (Ecuador). The total length (LT), sex and sexual characteristics were recorded, and stomach contents were collected. A total of 142 individuals were recorded, comprising 81 females (104–295 cm LT) and 61 males (127–245 cm LT). A total of 24 prey species were identified, including crustaceans, cephalopods, teleosts and cetaceans. According to the Prey-Specific Index of Relative Importance (PSIRI), the main prey taxa were the ommastrephid squid, Dosidicus gigas (42.57%) and Sthenoteuthis oualaniensis (21.04%), followed by fish from the family Hemiramphidae (11.85%). Isurus oxyrinchus is a specialist predator that preferred a low number of prey (Bi = 0.25), both by sex (Bi; females = 0.29 and males = 0.34) and life stages (Bi; juveniles = 0.27 and adults = 0.37). The trophic overlap was medium for sexes (J = 0.54) and biological cycle phases (J = 0.42). Trophic level (TLk) was 4.47, indicating that I. oxyrinchus is a tertiary predator. This information will help in fisheries management based on an ecosystem approach, where this species fulfils an ecological role, and its interactions with other species allow us to understand how the flow of nutrients and energy occurs within an ecosystem.

The diet and feeding habits of the pelagic thresher shark Alopias pelagicus were analysed based on 104 stomachs (N = 84 females, 20 males) collected off Santa Rosa de Salinas, in the Ecuadorian Pacific. The sharks were caught between February 2008 and January 2009 in artisanal fisheries. The trophic spectrum of A. pelagicus included 19 prey items (10 cephalopods and 9 teleost fishes), the main four prey were the red flying squid Ommastrephes bartramii, jumbo squid Dosidicus gigas, the purpleback flying squid Sthenoteuthis oualaniensis and the South Pacific hake Merluccius gayi. The trophic niche was narrow (Bi = 0.2), thus the pelagic thresher could be considered a specialist predator. The analysis of dietary overlap showed high similarity between the diets of females and males (Cλ = 0.99), immature and mature females (Cλ = 0.81), immature and mature males (Cλ = 0.72), sizes of 141–230 cm TL and 231–321 cm TL (Cλ = 0.97), as well as sharks in rainy season and dry season (Cλ = 0.77). Using canonical of correspondence analysis (CCA), we found similarities in the diet for all categories recorded (sex: canonical r = 0.38, P = 0.97; sexual maturity stage: canonical r = 0.54, P = 0.31; sizes: canonical r = 0.55, P = 0.26; seasons of the year: canonical r = 0.61, P = 0.75). The trophic level estimated for A. pelagicus was 5.0, which is typical of top predators (quaternary consumers or tertiary carnivores).