Ports have long been considered ‘high-risk’ areas for the introduction of non-native species (NNS) and should therefore be a focus of NNS monitoring. The industrial nature of active ports can, however, provide various problems when attempting to carry out monitoring programmes. Current methodologies designed to identify NNS and to describe fouling communities have not been developed specifically for use in active ports and can encounter a number of issues when used in these environments. Here, two surveys were developed and trialled within an active port in South Wales, UK, designed to describe fouling communities, identify NNS and overcome some of the major limitations to conducting surveys within ports. Over a 6-month period, fouling communities dominated by solitary ascidians developed in each survey. Seven NNS were identified, mostly species already recorded in the 1950s, including the Mediterranean crab Brachynotus sexdentatus, and the more recently introduced Japanese skeleton shrimp Caprella mutica. Each survey was evaluated independently with respect to key factors, including the ability to detect NNS and practical aspects of using these survey methods in an applied context. We conclude that whilst each survey can function independently, the use of both survey types in conjunction offers the most robust solution to identifying NNS and describing wider fouling communities within active ports. This research has implications for the future monitoring and management of NNS within UK ports.

The lagoon of Boughrara is the largest lagoon in Tunisia. For several decades it has been subject to the impact of increasing anthropogenic activities, and also to environmental stressors due to climate change and the low renewal of its waters. The present work is a contribution to the study of the functional organization of the benthic macrofauna of the lagoon of Boughrara 3 years after the extension of the channel ‘El Kantra’ which connects this lagoon to the open sea. In total, 13 stations facing the main prospective sources of disturbance and in areas likely to be more polluted were seasonally sampled during 2009–2010. Seasonal monitoring of the abiotic parameters shows a spatial heterogeneity linked to environmental and anthropogenic factors, including hydrodynamics, sedimentary texture and anthropogenic activities. The community of benthic macrofauna is generally poorly diversified at lagoonal-marine stations undergoing influences of both the marine and lagoon environment. The extreme seasons in terms of temperature and salinity seem to have an important role in the reduction of biodiversity in the lagoon of Boughrara. The trophic structure of the macrobenthic community is generally dominated by selective deposit feeders, and seems to be linked more to the availability of trophic resources than to disturbance.

Hydraulic dredging for bivalves, such as cockles (Cerastoderma edule), has the potential to cause significant impacts on marine intertidal benthos. Although this fishing activity is common in northern European Natura 2000 sites such impacts may be incompatible with conservation objectives for designated habitats and species within these sites. In 2009–2010 a spatially nested control-impact study was undertaken before (t0), 8–9 days after (t1) and 4 months (t2) following dredging and extraction of 108 tonnes of cockles from a standing stock of 2158 tonnes in Dundalk Bay. This study failed to detect significant effects on benthic sediments, or the overall community structure. However, a fishing effect on the target species C. edule in one sampling area and a short lived effect on the bivalve Angulus tenuis were identified. Significant spatial and temporal variability in abundance of species and taxonomic groups, unrelated to fishing effects, was observed. Previous studies on the effects of fisheries on marine intertidal benthos have reported variable results, related to study design and objectives and the physical characteristics of the study site. Site specific studies, relative to the intensity and frequency of proposed fishing activity, may be required to adequately inform managers whether such activities are compatible with specific conservation objectives for Natura 2000 sites.

This paper presents an inventory of the species of molluscs collected on the continental shelf and upper slopes (70–500 m depth) on the Pacific side of Colombia. In 2002, 39 trawl samples were taken on soft bottoms by the RV ARC ‘Malpelo’. Thirty-eight species of bivalves were collected, comprising living animals and dead collected shells. Information on abundance, Colombian distribution and depth range is provided. Thirty-four species represent the first records for the Colombian Pacific, significantly increasing the number of shelf and slope species known in the region.

The analysis of changes in benthic community structure using multivariate techniques has been successfully applied to the detection and monitoring of impacts caused by oil related activities. A survey to assess the status of the benthos was performed prior to a scheduled exploratory drilling at Banco Sarmiento, a shoal located off the eastern mouth of the Strait of Magellan (south-west Atlantic). The aims of this study are to provide baseline data about the composition and structure of the subtidal macrobenthic assemblages, to analyse the relationships between biodiversity and environmental variables, and to compare its benthic assemblages with those of neighbouring areas. Multivariate analyses classified the stations in two major groups, one composed of relatively shallow stations with coarse sediments dominated by filter-feeders, and the other consisting of stations with a high proportion of sand and mud dominated by deposit-feeders. Poorly sorted sediments had higher species richness than well sorted sediments. Shallow stations showed the lowest taxonomic distinctness due to the occurrence of a high proportion of bryozoans encrusting hard substrata. A five-fold increase in biodiversity can occur at scales of tens of km, suggesting that generalizations on regional biodiversity patterns should be made with caution because of the different gears used during the collection of samples, and should be based on a thorough knowledge about the physical environment.

We identified and quantified the benthic macrofauna associated with decomposing leaves of Rhizophora mangle and Laguncularia racemosa, to observe the differences in the abundance and composition of macrofauna between these mangrove species, and to examine whether the abundance and composition of organisms changed with different stations and collection times. Benthic macrofauna, mainly polychaetes and amphipods, were recorded from the fifth day after the installation of the experiment. Annelids including Oligochaeta and Polychaeta were the most numerous group. Crustacea were represented by peracarids (Amphipoda and Tanaidacea) and decapods. Of Hexapoda, only juvenile forms and pupae were present. The most abundant polychaete species was Perinereis brevicirrata, followed by Capitella cf. capitata, Heteromastus filiformis and Neanthes succinea. In one-way analysis of variance (ANOVA) there were no statistical differences between the macrofauna of mangrove species, seasons, or collection times, except among collection times for R. mangle litter bags. Two-way ANOVA showed homogeneity for macrofauna abundance between the groups of collection times for both mangrove species. The richness was similar for R. mangle litter bags, and showed a significant difference for L. racemosa. Abundance and richness were also similar between the mangrove species. The colonization of detritus by benthic invertebrates followed a successional sequence during the decomposition process. This suggests that the density of these organisms and their foraging behaviour affected the decomposition rates of leaves of R. mangle and L. racemosa.

The assemblage and the temporal changes of benthic macrofauna inhabiting the Phyllochaetopterus socialis (Polychaeta: Chaetopteridae) aggregates were analysed during 2004 and May 2005 in the Mar del Plata harbour, Buenos Aires (Argentina). Species composition, abundance, richness and diversity were estimated from monthly or bimonthly samples obtained by SCUBA diving. Multivariate (MDS) and SIMPER analyses were applied to analyse the structure of benthic communities. In the mats, a total of 57 species (invertebrates and chordates) belonging to 11 phyla were associated to P. socialis: crustaceans and molluscs were the most abundant species and crustaceans and polychaetes were the most diverse groups (14 and 11 species richness, respectively). The mean abundance ranged from 79.67±57.47 ind/250 ml to 718.75 ind/250 ml (mean±SD). The amphipod Monocorophium insidiosum, the gastropod Anachis isabellei and the tanaidacean Leptognathia sp. were the most representative species in the mats. Richness and diversity in P. socialis aggregates were higher than in surrounding sediments. Results show significant differences among months in composition, abundance and feeding guilds of the macrofauna associated with the mats. The assemblage of benthic macrofauna with permanent and temporary organisms in P. socialis aggregates suggests the existence of microhabitats in the mats that provide substrate, refuges for predation and availability of food increasing richness and diversity. These results allow considering P. socialis as an autogenic ecosystem engineer in the Mar del Plata harbour.

Coastal areas, in general, are affected more and more by anthropogenic activities. Benthic macrofauna assemblages react to this disturbance and constitute, then, an effective biological tool to study the degree of contamination of the biotope. For this study three coastal sites, more or less exposed to anthropogenic activities but differing according to their opening to the sea, were studied. Sediments were sampled aboard a research vessel and using a 0.1 m2 Van Veen grab. Results show that Tunis bay and Dkhila coast, which are more open to the sea, appear more balanced on the trophic plan, and the biodiversity state is more satisfactory. However, Bizerte lagoon is closed, except for a limited communication with the sea via a narrow ship canal. So, the ecosystem presents some eutrophication signs and a great trophic imbalance in which carnivores largely dominate the benthic assemblages. In this situation, the herbivore chain is substituted by a microbial chain and only some opportunistic species can survive in these anoxic sediments related to the strong fluctuations of the environment factors during the year.