Edge effects change biodiversity patterns and ecological processes, particularly in tropical forests. To understand the synergistic impact of multiple edges, this study examines how edge influence (EI) is associated with life-history traits (snout-vent length and body temperature), diversity and microhabitat of amphibians as well as habitat characteristics in a tropical forest in Ecuador. We used EI, a metric that calculates cumulative effects across all nearby edges, in combination with five environmental variables that are part of the amphibians’ microhabitat (temperature, humidity, slope, canopy cover and leaf litter depth) to understand how their biodiversity patterns are impacted. Our results show that most amphibian species tend to be habitat specialists, and many had an affinity for forest edges and warmer habitats. We do not find significant correlations between EI and amphibian life-history traits and diversity. Our findings corroborate previous results that many amphibian species tend to be positively associated with habitat fragmentation and show that this association is likely driven by thermal regulation.

We report on the first population found in Tanzania of the Vulnerable African golden cat Caracal aurata, extending its documented range c. 200 km to the south and south-east. This is one of the least-known and truly forest-dependent felines in Africa, ranging across the Guinea–Congolian forest block. We recorded the new population in Minziro Nature Forest Reserve, north-west Tanzania, during a 3-month survey in 2018. We deployed 70 camera traps on a regular grid and obtained 33 detection events of the golden cat at 26% of sites, with a minimum of 10 individuals across 257 km2. We estimated occupancy and detection probability and modelled these in relation to the distance of sampling sites to the forest edge, which coincides with both the Reserve boundary and proximity to human settlements surrounding the Reserve. Mean estimated occupancy was 0.41 ± SE 0.12 (mean detectability = 0.13 ± SE 0.05), with occupancy increasing significantly with distance from the forest edge. Detectability did not vary significantly with distance from the forest edge, but was higher for camera models that had a shorter trigger time. Our findings add to the scant data available for this species. It appears threatened by human activity, which we recorded both outside and within the Reserve, and the presence of the species indicates Minziro Forest is an important site for its conservation.

Biodiversity conservation in forest fragments surrounded by a low-quality matrix requires an understanding of how ecological conditions prevailing in the matrix enter the fragments and interact with local habitat conditions. We assessed the regeneration of oak species along edge–interior gradients in forest fragments at the periphery of Mexico City. The abundance of oak saplings was sampled along transects to the forest, while the edge effect was analysed using segmented zero-inflated Poisson models for abundance data. Three oak species were dominant in terms of their relative abundances: Quercus laeta, Quercus castanea and Quercus obtusata. Regeneration of nine oak species responded nonlinearly to the edge distance, with greater sapling abundance from the edge up to 10 m into the fragment. Canopy cover and tree height decreased from edge to fragment interior, while saplings increased in open areas within the fragments (i.e., independent of edge distance). A posterior analysis indicated that Q. obtusata reacted positively to edges. These results indicate that oak regeneration is promoted by suitable habitat conditions near the boundaries. Therefore, we suggest that forest management should focus on promoting seed production and oak establishment in forest interior habitats.

Anthropogenic disturbance often results in the proliferation of native species of particular groups that leads to biotic homogenization. Leaf-cutting ants are an example of such winner organisms in tropical rain forests, but their response to disturbance in dry forests is poorly known. We investigated Atta colony density in areas of tropical dry forest in Brazil with different distance to roads and vegetation cover. Atta colonies were surveyed in 59 belt transects of 300 × 20 m, covering a total area of 35.4 ha. We found 224 Atta colonies, 131 of which were active and belonged to Atta opaciceps (87 colonies, 2.45 ha−1), A. sexdens (35 colonies, 0.98 ha−1) and A. laevigata (9 colonies, 0.25 ha−1). The density of active colonies sharply decreased from 15 ± 2.92 ha−1 in the 50-m zone along roads to only 2.55 ± 1.65 ha−1 at distances up to 300 m. The reverse pattern was observed for inactive colonies. Active Atta colonies preferentially occur in areas with low vegetation cover, while inactive colonies prefer areas with high vegetation cover. We demonstrate for the first time that anthropogenic disturbances promote the proliferation of leaf-cutting ants in dry forest in Brazil, which may affect plant regeneration via herbivory and ecosystem engineering as demonstrated for rain forests.

We compared exotic pasture grass cover near the edges of 20–25-y-old secondary forests (N = 8) with those of mature forests (N = 8), bordering actively grazed pastures on the Pacific Coast of Ecuador. We estimated grass cover in 224 1 × 3-m plots along transects that ran from the pasture edge into forest interiors (11–44 m). Using a spline regression, we divided the transects into three segments: exterior (in the pasture), edge and interior (in the forest). With a stepwise regression, we tested the effect of transect section, forest type and distance from edge on grass cover. Forest type, distance from edge, interior transect section and the combined effect of distance from edge in both the interior and exterior sections explained variation in grass cover. Grass abundance was higher and penetrated further into secondary than mature forests. Edge proximity and differences in forest canopy openness likely favours recruitment and persistence of pasture grasses.

The presence of domestic species such as dogs Canis familiaris in protected areas can cause problems for native species as a result of competition, predation and disease transmission. To improve our ability to design effective control policies we investigated the factors affecting detection of dog tracks in a Mediterranean national park.

We investigated the presence of dogs across 69 2 × 2 km grid squares in Doñana National Park in south-west Spain and used logistic regression models to analyse the associated environmental and human constraints. We did not detect dogs in areas away from the edges of the national park close to human settlements (track census effort > 470 km) and the detection of dog tracks was correlated with human presence. We conclude that domestic dogs occasionally enter the Park from the surrounding area and are a direct threat to wildlife at the edges of the Park. Management actions to reduce the effects of domestic dogs in protected areas where feral dog populations are not established should focus on the spatial extent of local settlements, regulation and awareness-raising to encourage responsible dog-ownership, and control measures such as removing un-owned dogs from boundaries and areas close to human dwellings, and forbidding unleashed dogs in public facilities.

Pinna nobilis is an endemic bivalve of the Mediterranean Sea. In the last decades P. nobilis populations have declined drastically due to increasing anthropogenic pressure and it has been declared a protected species since 1992. Despite the need for conservation, knowledge of the ecology and monitoring of the main populations of P. nobilis are limited. This study considered a population living within a Posidonia oceanica meadow in the Gulf of Oristano (western Mediterranean, Italy). The study area, about 150 hectares, part of which is included within a Marine Protected Area and a Site of Community Importance, was subdivided in 3 sub-areas. The percentage cover of different habitat types (P. oceanica, dead matte and sand) in each sub-area was measured and meadow features (substrate coverage, matte compactness and shoot density) characterized. The hypotheses of differences in density, percentage of dead individuals, population structure, shell burial level and orientation of P. nobilis, were investigated according to sub-areas and to habitat type. The spatial distribution was patchy, and the habitat type resulted a key factor in determining both density and distribution. A strong edge effect was demonstrated: more than half of the observed individuals colonized the P. oceanica border. Matte compactness and shoot density were found to affect the density and distribution of P. nobilis. Shell burial level and percentage of dead individuals varied with sub-areas and habitat types. Size distribution was bimodal and common shell orientation was observed in two sub-areas. These results contribute to increase the knowledge of population ecology of this species and to provide useful information for implementing conservation policies.

Edge effects encompass biotic and abiotic changes resulting from the interaction between two different habitat types (Murcia 1995). Edge habitats are ecologically distinct from patch interiors, and understanding how ecological patterns change near edges is important in understanding landscape-level dynamics such as the impacts of fragmentation (Ries et al. 2004). Abiotic conditions at the forest edge, such as increased wind and solar radiation, increased fluctuations in temperature, and decreased humidity, may affect forest-adapted organisms (Harper et al. 2005, Murcia 1995). So, edges may affect lizards and amphibians due to their physiological needs (Lehtinen et al. 2003, Vallan 2000). Anurans are considered sensitive to environmental changes due to their permeable skin, shell-less eggs and use of land as well as freshwater habitats (Vallan 2000). Changes in vegetation structure and microclimate are likely to be the predominant factor affecting amphibian abundances across edges (Jellinek et al. 2004, Marsh & Pearman 1997, Schaepfer & Gavin 2001, Urbina-Cardona et al. 2006).

The dry grasslands of the Mediterranean Basin have been traditionally managed since ancient times, but have been drastically degraded by recent human activities such as cultivation. Cultivated plots in a dry grassland of Southern France were abandoned more than 20 years ago, but their vegetation and ground-active beetle community structure and composition differ considerably from neighbouring uncultivated grassland plots. Because these formerly cultivated plots are adjacent to an uncultivated grassland area, they constitute a model system for examining beetle recolonization patterns on field margins. No edge effect or ecotone was identified on the margins between two of the formerly cultivated plots and the uncultivated dry grassland; there was no significant peak of beetles species richness in this area. All the most common dry grassland beetle species (mainly saprophagous and predatory species, which are less habitat-specialist than phytophagous species) had already recolonized the formerly cultivated plots. However, although uncultivated dry grassland was adjacent to the formerly cultivated plots it was insufficient for complete regeneration of dry grassland beetle communities on formerly cultivated plots, indicating habitat quality remained lower even after 20 years. Understanding the causes of spatial variation in active-ground beetles at the species level is important before the ecological restoration of habitat quality to its prior state, using the adjacent steppe as a reference.

We quantified habitat associations and evaluated the conservation status of a recently identified, undescribed species of dwarf chameleon, Bradypodion sp. nov. Dhlinza, endemic to scarp forest remnants in KwaZulu-Natal Province, South Africa. At the microhabitat scale the Dhlinza dwarf chameleon was found more often in forest gaps and near paths than highly disturbed edges or forest interior. Chameleon presence was not explained by forest physiognomic variables such as vine cover, shrub and tree density, or canopy cover. Presence near gaps may be better explained by the combined effects of the thermal microenvironment and food availability. The species is moderately common where it occurs, with estimated densities of 4.7, 8.7 and 29.7 individuals per ha within forest interior, edges and gaps respectively. At the landscape scale, the chameleon occurs only in three remnant forests: the Dhlinza, Entumeni and Ongoye Forests. The species' extent of occurrence was estimated to be 88 km2 and its area of occupancy 49 km2. Based on the small area of remaining suitable habitat, this species meets the requirements for categorization as Endangered according to IUCN Red List criteria.

Our objective is to construct a perfect simulation algorithm for unmarked and marked Hawkes processes. The usual straightforward simulation algorithm suffers from edge effects, whereas our perfect simulation algorithm does not. By viewing Hawkes processes as Poisson cluster processes and using their branching and conditional independence structures, useful approximations of the distribution function for the length of a cluster are derived. This is used to construct upper and lower processes for the perfect simulation algorithm. A tail-lightness condition turns out to be of importance for the applicability of the perfect simulation algorithm. Examples of applications and empirical results are presented.

We introduce a class of Cox cluster processes called generalised shot noise Cox processes (GSNCPs), which extends the definition of shot noise Cox processes (SNCPs) in two directions: the point process that drives the shot noise is not necessarily Poisson, and the kernel of the shot noise can be random. Thereby, a very large class of models for aggregated or clustered point patterns is obtained. Due to the structure of GSNCPs, a number of useful results can be established. We focus first on deriving summary statistics for GSNCPs and, second, on how to simulate such processes. In particular, results on first- and second-order moment measures, reduced Palm distributions, the J-function, simulation with or without edge effects, and conditional simulation of the intensity function driving a GSNCP are given. Our results are exemplified in important special cases of GSNCPs, and we discuss their relation to the corresponding results for SNCPs.

Abnormal thalamocortical dynamics have been proposed as the underlying mechanism for a subset of neurological and psychiatric disorders that include centrally generated pain. Spectral analysis and independent component-based localization of neuromagnetic signals reveal ongoing theta-range activity localized to physiologically significant cortical regions in a group of subjects with well-characterized central and peripheral lesions. In addition, recordings from subjects who failed to obtain relief from spinal cord stimulation (SCS) and from those in whom SCS was successful further delineate thalamocortical dysrhythmias as a mechanism that underlies chronic pain.

In fragmented tropical landscapes, among the most pervasive causes of ecological change are edge effects – diverse ecological alterations associated with the abrupt, artificial boundaries of forest fragments (Laurance & Bierregaard 1997, Lovejoy et al. 1986, Turner 1996). A striking edge effect in fragmented Amazonian forests is chronically elevated tree mortality (Ferreira & Laurance 1997, Laurance et al. 1998a). Large (> 60 cm diameter) trees are especially vulnerable to fragmentation, dying three times faster within 300 m of edges than in forest interiors (Laurance et al. 2000). Elevated tree mortality alters canopy-gap dynamics, promotes a proliferation of disturbance-adapted successional species (Laurance et al. 1998b), reduces above-ground biomass (Laurance et al. 1997), and accelerates litter production (Didham & Lawton 1999, Sizer et al. 2000) and carbon cycling (Nascimento & Laurance, in press).

The factors that affect the selection of feeding sites by giant pandas Ailuropoda melanoleuca in the Longxi-Hongkou Nature Reserve were explored in winter from 2000 to 2002, by using strip transects. It was reported in the literature that giant pandas prefer to forage on the edges of bamboo patches because these edges offer them more food than the interiors. The number of feeding sites and the corresponding vegetation indices (including the basal diameter of bamboo stem, height and density of bamboo or bamboo shoot; density and canopy density of trees) were compared close to and far away from the edges of bamboo patches to detect the patterns of feeding habitat selection by giant pandas. Giant pandas preferred to forage at the sites near edges rather than in the interiors of bamboo patches. Such a tendency was independent of bamboo species and individual pandas. By comparing the density, basal diameter of bamboo stem and shoot, tree density and available dry biomass of bamboo, we detected no significant differences between the edges and the interiors of bamboo patches. The possible explanations were analysed and it was deemed that the selection of food habitat near edges by the giant pandas could be attributed to the direct effects of edges, which facilitate movement of the giant pandas in the otherwise dense bamboo patches.

Shot noise Cox processes constitute a large class of Cox and Poisson cluster processes in ℝd, including Neyman-Scott, Poisson-gamma and shot noise G Cox processes. It is demonstrated that, due to the structure of such models, a number of useful and general results can easily be established. The focus is on the probabilistic aspects with a view to statistical applications, particularly results for summary statistics, reduced Palm distributions, simulation with or without edge effects, conditional simulation of the intensity function and local and spatial Markov properties.

Thalamic and cortical neurons are richly and reciprocally interconnected and support recurrent functional loops in the intact brain, but the role of this circuitry is still poorly understood. Here, we present evidence—from cellular and from functional neuroimaging in control and clinical domains—that thalamocortical resonance is not only a prerequisite for normal cognition, but that its perturbation, in a dynamic sense (e.g. a dysrhythmia) can underlie a variety of neurological and psychiatric disorders.

We consider a random measure for which distribution is invariant under the action of a standard transformation group. The reduced moments are defined by applying classical theorems on invariant measure decomposition. We present a general method for constructing unbiased estimators of reduced moments. Several asymptotic results are established under an extension of the Brillinger mixing condition. Examples related to stochastic geometry are given.

Fruiting phenology, habitat types and proximity to conspecific fruiting adults may influence the degree of escape from pre- and post-dispersal seed predators. Successful predator escape by means of satiation is considered to be especially important for selection of masting and monocarpic reproduction in trees, such as exhibited by Tachigali versicolor, a tropical canopy tree. How pre- and post-dispersal predation rates varied with dispersal timing and among trees in T. versicolor was examined in young and old forests on Barro Colorado Island in Panama during a 4-mo period. Seeds were collected from above-ground traps to assess predispersal predation by bruchid beetles, and from quadrats on the ground to record predation and removal by terrestrial mammals. Proportion of seeds aborted varied greatly among trees (range 6–30 %, mean 16 %), and was especially high for trees on the edge of the island with fruiting conspecifics nearby during the early part of fruiting season. The proportion of seeds killed by bruchid beetles varied less among trees (14–25 %, mean 20 %), and remained constant throughout the fruiting season. Seeds on the ground were attacked mostly by rodents, and possibly by deer (26 % of all seeds and 43 % of intact dispersed seeds). The post-dispersal predation level was higher in the young forest than in the old forest (61 and 26 % of intact dispersed seeds, respectively), and was unaffected by the proximity of fruiting conspecifics. Temporal satiation of seed predators was evident only for post-dispersal mammalian predators in the old forest.