Several recent studies have shown that it is possible
to increase protein stability by improving electrostatic
interactions among charged groups on the surface of the
folded protein. However, the stability increases are considerably
smaller than predicted by a simple Coulomb's law calculation,
and in some cases, a charge reversal on the surface leads
to a decrease in stability when an increase was predicted.
These results suggest that favorable charge–charge
interactions are important in determining the denatured
state ensemble, and that the free energy of the denatured
state may be decreased more than that of the native state
by reversing the charge of a side chain. We suggest that
when the hydrophobic and hydrogen bonding interactions
that stabilize the folded state are disrupted, the unfolded
polypeptide chain rearranges to compact conformations with
favorable long-range electrostatic interactions. These
charge–charge interactions in the denatured state
will reduce the net contribution of electrostatic interactions
to protein stability and will help determine the denatured
state ensemble. To support this idea, we show that the
denatured state ensemble of ribonuclease Sa is considerably
more compact at pH 7 where favorable charge–charge
interactions are possible than at pH 3, where unfavorable
electrostatic repulsion among the positive charges causes
an expansion of the denatured state ensemble. Further support
is provided by studies of the ionic strength dependence
of the stability of charge–reversal mutants of ribonuclease
Sa. These results may have important implications for the
mechanism of protein folding.