Hostname: page-component-78c5997874-ndw9j Total loading time: 0 Render date: 2024-11-10T13:05:53.337Z Has data issue: false hasContentIssue false

Genetics of Scottish populations of the native oyster, Ostrea edulis: gene flow, human intervention and conservation

Published online by Cambridge University Press:  07 February 2007

Andy Beaumont
Affiliation:
School of Ocean Sciences, University of Wales, Bangor, Menai Bridge, Gwynedd, LL59 5AB, UK
Manuela Truebano Garcia
Affiliation:
School of Ocean Sciences, University of Wales, Bangor, Menai Bridge, Gwynedd, LL59 5AB, UK
Stephan Hönig
Affiliation:
School of Ocean Sciences, University of Wales, Bangor, Menai Bridge, Gwynedd, LL59 5AB, UK
Paula Low
Affiliation:
University Marine Biological Station Milport, Isle of Cumbrae Scotland, KA28 0EF, UK
Get access

Abstract

The European, native or flat oyster, Ostrea edulis, has been the subject of human-mediated translocation and aquaculture in Europe for centuries and may have diluted or masked natural population genetic structure. Samples of O. edulis from 10 sites in Scotland and The Netherlands, Brittany and Norway were collected and genotyped at up to six microsatellite loci. Numbers of alleles and heterozygosity per locus were high in all populations and were consistent with previous microsatellite studies. There is no evidence that extensive traditional oyster aquaculture has led to loss of allelelic diversity. Deficiencies of heterozygotes against Hardy-Weinberg predictions were common and were probably mainly due to the presence of null alleles. Overall, population differentiation (F st = 0.05) was estimated to be higher than previous studies and could be resolved into four main genetic groups (1) Norway, (2) The Netherlands and Brittany, (3) Scotland apart from (4) Skye. The genetic distinctness of Norway oysters agrees with previous findings. The distinctiveness of the Skye population could be partly due to an artefact of small sample sizes and partly due to the founder effect of importation of Brittany oysters in the 1950s. Further studies are required to ascertain whether the Skye population may be deserving of special conservation status. The results suggest that human aquaculture activities over recent centuries have probably diluted any original local genetic differentiation within Scotland, but that potentially important genetic differentiation still exists at the wider scale across Europe

Type
Research Article
Copyright
© EDP Sciences, IFREMER, IRD, 2007

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Anonymous, 1885-1977, Fish. Bd. Scot. Ann. Rep. Her Majesty's Stationary Office, No. 4-65.
Beaumont A.R., Hoare K., 2003, Biotechnology and Genetics in Fisheries and Aquaculture, Blackwell Science, Oxford.
Boudry, P., Collet, B., Cornette, F., Hervouet, V., Bonhomme, F., 2002, High variance in reproductive success of the Pacific oyster (Crassostrea gigas Thunberg) revealed by microsatellite-based parentage analysis of multifactorial crosses. Aquaculture 204, 283-296. CrossRef
Bruford, M.W., Wayne, R.K., 1993, Microsatellites and their application to population genetic studies. Curr. Opinion Genet. Devel. 3, 939-943. CrossRef
Carvalho G.R., Hauser L., 1998, Advances in the molecular analysis of fish population structure. Ital. J. Zool. 65 (suppl.) 21-33.
Cornuet, J.M., Luikart, G., 1996, Description and power analysis of two tests for detecting recent bottlenecks from allele frequency data. Genetics 144, 2001-2014.
Diaz-Almela, E., Boudry, P., Launey, S., Bonhomme, F., Lapegue, S., 2004, Reduced female gene flow in the European flat oyster Ostrea edulis. J. Hered. 95, 510-516. CrossRef
Fulton, T.W., 1895, The past and the present condition of the oyster beds in the Firth of Forth. Fish. Board Scot. Ann. Rep. 14, 244-293.
Gaffney P.M., 1994, Heterosis and heterozygote deficiencies in marine bivalves: more light? In: Beaumont, A. R.(ed.) Genetics and evolution of aquatic organisms, London, Chapman and Hall, pp. 146-153.
Goudet, J. 2001. FSTAT, a program to estimate and test gene diversities and fixation indices (version 2.9.3). [Updated from Goudet, J., 1995, FSTAT (version 1.2): a computer program to calculate F-statistics. J. Hered. 86, 485-486.] Available from http://www.unil.ch/izea/softwares/fstat.html. CrossRef
Hedgecock D., Launey S., Pudovkin A., Naciri Y., Lapègue S., Bonhomme F., 2007, Small effective number of parents (N b) inferred for a naturally spawned cohort of juvenile European flat oysters Ostrea edulis. Mar. Biol. 150, in press.
Hoare, K., Beaumont, A.R., 1995, Effects of an Odh null allele and GPI low activity allozyme on shell length in laboratory-reared Mytilus edulis L. Mar. Biol. 123, 775-780. CrossRef
Hochberg, Y., 1988, A sharper Bonferroni procedure for multiple tests of significance. Biometrika 75, 800-802. CrossRef
Johannesson, K., Rodstrom, E.M., Aase, H., 1989, Low genetic variation in Scandinavian populations of Ostrea edulis L – possible causes and implications. J. Exp. Mar. Biol. Ecol. 128, 177-190. CrossRef
Karl, S.A., Avise, J.C., 1992, Balancing selection at allozyme loci in oysters: implications from nuclear RFLPs. Science 256, 100-102. CrossRef
Laing I., Walker P., Areal F., 2005, A feasibility study of native oyster (Ostrea edulis) stock regeneration in the United Kingdom. Defra & Seafish Publication, CEFAS, Weymouth.
Launey, S., Ledu, C., Boudry, P., Bonhomme, F., Naciri-Graven, Y., 2002, Geographic structure in the European flat oyster (Ostrea edulis L.) as revealed by microsatellite polymorphisms. J. Hered. 93, 331-351. CrossRef
Magennis, B.A., Gosling, E., Wilkins, N.P., 1983, Irish oyster populations: an historical and genetic study. Proc. R. Irish Acad. 83B, 291-299.
Millar, R.H., 1961, Scottish oyster investigations 1946-1958. Dep. Agric. Fish. Scot. Mar. Res. 3, 5-75.
Millar, R.H., 1963, Investigations of the oyster beds in Loch Ryan. Dep. Agric. Fish. Scot. Mar. Res. 5, 3-23.
Miller M., 1997, Tools for population genetic analysis: a windows program for the analysis of allozyme and molecular population genetic data. http://bioweb.usu.edu/mpmbio/index.htm.
McGoldrick, D.J., Hedgecock, D., English, L.J., Baoprasertkul, P., Ward, R.D., 2000, The transmission of microsatellite alleles in Australian and North American stocks of the Pacific oyster (Crassostrea gigas): selection and null alleles. J. Shellfish Res. 19, 779-786.
Morgan, T.S., Rogers, A.D., Iyengar, A., 2000, Novel microsatellite markers for the European oyster Ostrea edulis. Mol. Ecol. 9, 495-496. CrossRef
Naciri, Y., Vigouroux, Y., Dallas, J., Desmarais, E., Delsert, C., Bonhomme, F, 1995, Identification and inheritance of (GA/TC)n and (AC/GT)n repeats in the European flat oyster. Mol. Mar. Biol. Biotech. 4, 83-87.
Nei, M., 1978, Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89, 583-590.
Rose, C.G., Paynter, K.T., Hare, M.P., 2006, Isolation by distance in the eastern oyster, Crassostrea virginica, in Chesapeake Bay. J. Hered. 97, 158-170. CrossRef
Rousset F., 1997. Genetic differentiation and estimation of gene flow from F-statistics under isolation by distance. Genetics 145, 1219-1228.
Saavedra, C., Zapata, C., Alvarez, G., 1995, Geographical patterns of variability at allozyme loci in the European flat oyster, Ostrea edulis. Mar. Biol. 122, 95-104.
Saavedra, C., Zapata, C., Guerra, A., Alvarez, G., 1993, Allozyme variation in European populations of the oyster Ostrea edulis. Mar. Biol. 115, 85-95. CrossRef
Sambrook J., Fritsch E.F., Maniatis T., 1989, Molecular Cloning: A Laboratory Manual. Cold Spring Harbor, NY, Cold Spring Harbor Laboratory Press.
Smith, W., 1895, Report by Mr W. Anderson Smith, a member of the Board to whom the matter was remitted, on the progress of the experiments in oyster culture carried on at Loch Sween. Appendix O, No. II, Fish. Board Scot. Ann. Rep. 13, 195-196.
Sobolewska H., Beaumont A.R., 2005. Genetic variation at microsatellite loci in northern populations of the European flat oyster (Ostrea edulis). J. Mar. Biol. Assoc. UK 85, 955-960.
Sobolewska, H., Beaumont, A.R., Hamilton, A., 2001, Dinucleotide microsatellites isolated from the European flat oyster, Ostrea edulis. Mol. Ecol. Note 1, 79-80. CrossRef
Sunnucks P., 2000. Efficient genetic markers for population biology. Trends Ecol. Evol. 15, 199-203.
Vercaemer, B., Spence, K.R., Herbinger, C.M., Lapegue, S., Kenchington, E. L., 2006, Genetic diversity of the European oyster (Ostrea edulis L.) in Nova Scotia: comparison with other parts of Canada, Maine and Europe and implications for broodstock management. J. Shellfish Res. 25, 543-551. CrossRef
Wilding, C.S., Beaumont, A.R., Latchford, J.W., 1997, Mitochondrial DNA variation in the scallop Pecten maximus (L.), assessed by a PCR-RFLP method. Heredity 79, 178-189. CrossRef
Weir, B.S., Cockerham, C.C., 1984, Estimating F-statistics for the analysis of population structure. Evolution 38, 1358-1370.
Wright, S., 1965, The interpretation of population structure by F-statistics with special regard to systems of mating. Evolution 19, 395-420. CrossRefPubMed
Zane, L., Bargelloni, L., Paternello, T., 2002, Strategies for microsatellite isolation: a review. Mol. Ecol. 11, 1-16. CrossRef
Zouros, E., Foltz, D.W., 1984, Possible explanations of heterozygote deficiency in bivalve mollusks. Malacologia 25, 583-591.