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The application of genotyping techniques to the epidemiological analysis of Campylobacter jejuni

Published online by Cambridge University Press:  15 May 2009

C. J. Jackson
Affiliation:
Public Health Laboratory, Withington Hospital, Manchester, M20 2LR
A. J. Fox*
Affiliation:
Public Health Laboratory, Withington Hospital, Manchester, M20 2LR
D. R. A. Wareing
Affiliation:
Public Health Laboratory, Royal Preston Hospital, PO Box 202, Sharoe Green Lane, Preston, PR2 4HG
D. N. Hutchinson
Affiliation:
Public Health Laboratory, Royal Preston Hospital, PO Box 202, Sharoe Green Lane, Preston, PR2 4HG
D. M. Jones
Affiliation:
Public Health Laboratory, Withington Hospital, Manchester, M20 2LR
*
Author for correspondence and reprint requests.
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Summary

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Campylobacter jejuni serogroup reference strains and collections of sporadic and outbreak- associated isolates were examined for restriction fragment length polymorphisms (RFLPs), using C. jejuni random chromosomal and 16S rRNA gene probes. A collection of 48 Penner (HS) and 14 Lior (HL) serogroup reference strains, plus 10 clinical isolates, generated 35 RFLP and 26 ribotype patterns. In combination the two loci generated 48 distinct genotypes. Both probes were able to differentiate between certain random isolates of the same HS/HL serogroups but greater discrimination was obtained with RFLP than with ribotyping. Genotyping distinguished accurately between related and unrelated strains when applied to several outbreaks. Genotypic analysis of C. jejuni by restriction fragment length polymorphisms is a valuable technique for epidemiological typing. Chromosomal variation detected by the two unlinked probe loci provides some information about the genetic relationship between isolates.

Type
Research Article
Copyright
Copyright © Cambridge University Press 1996

References

1.Cowden, J. Campylobacter: Epidemiological paradoxes. BMJ 1992; 305: 132–3.CrossRefGoogle ScholarPubMed
2.Gibson, JR, Fitzgerald, C, Owen, RJ. Comparison of PFGE, ribotyping and phage-typing in the epidemiological analysis of Campylobacter jejuni serotype HS2 infections. Epidemiol Infect 1995; 115: 215–25.CrossRefGoogle ScholarPubMed
3.Fayos, A, Owen, RJ, Hernandez, J, Jones, C, Lastovica, A. Molecular subtyping by genome and plasmid analysis of Campylobacter jejuni serogroups 01 and 02 (Penner) from sporadic and outbreak cases of human diarrhoea. Epidemiol Infect 1993; 111: 415–27.CrossRefGoogle Scholar
4.Stanley, J, Linton, D, Sutherland, K, Jones, C, Owen, RJ. High resolution genotyping of Campylobacter coli identifies clones of epidemiologic and evolutionary significance. J Infect Dis 1995; 172: 1130–4.CrossRefGoogle ScholarPubMed
5.Owen, RJ, Sutherland, K, Fitzgerald, C, Gibson, J, Borman, P, Stanley, J. Molecular subtyping scheme for serotypes HS1 and HS4 of Campylobacter jejuni. J Clin Microbiol 1995; 33: 872–7.CrossRefGoogle ScholarPubMed
6.Ni, H, Knight, AI, Cartwright, KAV, McFadden, JJ. Phylogenetic and epidemiological analysis of Neisseria meningitidis using DNA probes. Epidemiol Infect 1992; 109: 227–39.CrossRefGoogle ScholarPubMed
7.Frost, EH, Deslandes, S, Veilleux, S, Bourgaux-Ramoisy, D. Typing Chlamydia trachomatis by detection of restriction fragment length polymorphism in the gene encoding the major outer membrane protein. J Infect Dis 1991; 163: 1103–7.CrossRefGoogle ScholarPubMed
8.Bolton, FJ, Holt, AV, Hutchinson, DN. Campylobacter biotyping scheme of epidemiological value. J Clin Pathol 1984; 37: 677–81.CrossRefGoogle ScholarPubMed
9.Salama, SM, Bolton, FJ, Hutchinson, DN. Application of a new phagetyping scheme to campylobacters isolated during outbreaks. Epidemiol Infect 1990; 104: 405–11.CrossRefGoogle ScholarPubMed
10.Penner, JL, Hennessy, JN. Passive hemagglutination technique for serotyping Campylobacter fetus subspecies jejuni on the basis of soluble heat stable antigens. J Clin Microbiol 1980; 12: 732–7.CrossRefGoogle Scholar
11.Lior, H, Woodward, DL, Edgar, JA, LaRoche, LJ, Gill, P. Serotyping of Campylobacter jejuni by slide agglutination based on heat-labile antigenic factors. J Clin Microbiol 1982; 15: 761–8.CrossRefGoogle ScholarPubMed
12.Brosius, JPalmer, ML, Kennedy, PJ, Noller, HF. Complete nucleotide sequence of 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci USA 1978; 75: 4801–5.CrossRefGoogle ScholarPubMed
13.Preston, MA, Penner, JL. Characterization of cross- reacting serotypes of Campylobacter jejuni. Can J Microbiol 1989; 35: 265–73.CrossRefGoogle ScholarPubMed
14.Jackson, CJ. Typing and environmental detection of Campylobacter jejuni [Ph.D. thesis]. Manchester: Manchester Metropolitan University, 1995.Google Scholar
15.Orr, KE, Lightfoot, NF, Sisson, PR et al. Direct milk excretion of Campylobacter jejuni in a dairy cow causing cases of human enteritis. Epidemiol Infect 1995; 114: 1524.CrossRefGoogle Scholar
16.Patton, CM, Wachsmuth, IK, Evins, GM et al. Evaluation of 10 methods to distinguish epidemic-associated Campylobacter strains. J. Clin Microbiol. 1991; 29: 680–8.CrossRefGoogle ScholarPubMed
17.Jones, DM, Abbott, JD, Painter, MJ, Sutcliffe, EM. A comparison of biotypes and serotypes of Campylobacter sp. isolated from patients with enteritis and from animal and environmental sources. J Infect 1984; 9: 51–8.CrossRefGoogle ScholarPubMed
18.Kiehlbauch, JA, Cameron, DN, Wachsmuth, IK. Evaluation of ribotyping techniques as applied to Arcobacter, Campylobacter and Helicobacter. Mol Cell Probes 1994; 8: 109–16.CrossRefGoogle ScholarPubMed
19.Owen, RJ, Fitzgerald, C, Sutherland, K, Borman, P. Flagellin gene polymorphism analysis of Campylobacter jejuni infecting man and other hosts and comparison with biotyping and somatic antigen serotyping. Epidemiol Infect 1994; 113: 221–34.CrossRefGoogle ScholarPubMed
20.Burnens, AP, Wagner, J, Lior, H, Nicolet, J, Frey, J. Restriction fragment length polymorphisms among the flagellar genes of the Lior heat-labile serogroup reference strains and field strains of Campylobacter jejuni and C. coli. Epidemiol Infect 1995; 114: 423–31.CrossRefGoogle ScholarPubMed
21.Wachsmuth, IK, Kiehlbauch, JA, Bopp, CA et al. The use of plasmid profiles and nucleic acid probes in epidemiologic investigations of foodborne, diarrheal diseases. Int J Food Microbiol 1991; 12: 7790.CrossRefGoogle ScholarPubMed
22.Forbes, KJ, Fang, Z, Pennington, TH. Allelic variation in the Helicobacter pylori fiagellin genes fla A and fla B: its consequences for strain typing schemes and population structure. Epidemiol Infect 1995; 114: 257–66.CrossRefGoogle Scholar
23.Tenover, FC, Arbeit, RD, Goering, RV et al. Interpreting chromosal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J Clin Microbiol 1995; 33: 2233–9.CrossRefGoogle Scholar
24.Achtman, M, Mercer, A, Kusecek, B et al. Six widespread bacterial clones among Escherichia coli KI isolates. Infect Immun 1983; 39: 315–35.CrossRefGoogle Scholar