Hostname: page-component-78c5997874-4rdpn Total loading time: 0 Render date: 2024-11-11T02:38:20.476Z Has data issue: false hasContentIssue false

The Coalescent in Peripatric Metapopulations

Published online by Cambridge University Press:  30 January 2018

Amaury Lambert*
Affiliation:
Université Pierre et Marie Curie and Collège de France
Chunhua Ma*
Affiliation:
Université Pierre et Marie Curie, Collège de France and Nankai University
*
Postal address: Laboratoire de Probabilités et Modèles Aléatoires, Université Pierre et Marie Curie, CNRS UMR 7599, Paris, France. Email address: amaury.lambert@upmc.fr
∗∗ Postal address: School of Mathematical Sciences and LPMC, Nankai University, Tianjin, P. R. China. Email address: mach@nankai.edu.cn
Rights & Permissions [Opens in a new window]

Abstract

Core share and HTML view are not available for this content. However, as you have access to this content, a full PDF is available via the ‘Save PDF’ action button.

We consider a dynamic metapopulation involving one large population of size N surrounded by colonies of size εNN, usually called peripheral isolates in ecology, where N → ∞ and εN → 0 in such a way that εNN → ∞. The main population, as well as the colonies, independently send propagules to found new colonies (emigration), and each colony independently, eventually merges with the main population (fusion). Our aim is to study the genealogical history of a finite number of lineages sampled at stationarity in such a metapopulation. We make assumptions on model parameters ensuring that the total outer population has size of the order of N and that each colony has a lifetime of the same order. We prove that under these assumptions, the scaling limit of the genealogical process of a finite sample is a censored coalescent where each lineage can be in one of two states: an inner lineage (belonging to the main population) or an outer lineage (belonging to some peripheral isolate). Lineages change state at constant rate and (only) inner lineages coalesce at constant rate per pair. This two-state censored coalescent is also shown to converge weakly, as the landscape dynamics accelerate, to a time-changed Kingman coalescent.

Type
Research Article
Copyright
© Applied Probability Trust 

References

Aguilée, R., Claessen, D. and Lambert, A. (2009). Allele fixation in a dynamic metapopulation: founder effects vs refuge effects. Theoret. Popul. Biol. 76, 105117.Google Scholar
Aguilée, R., Claessen, D. and Lambert, A. (2013). Adaptive radiation driven by the interplay of eco-evolutionary and landscape dynamics. Evolution 67, 12911306.Google ScholarPubMed
Aguilée, A., Lambert, A. and Claessen, D. (2011). Ecological speciation in dynamic landscapes. J. Evolutionary Biol. 24, 26632677.CrossRefGoogle ScholarPubMed
Bradley, R. C. (2005). Basic properties of strong mixing conditions. A survey and some open questions. Prob. Surveys 2, 107144.Google Scholar
Coyne, J. A. and Orr, H. A. (2004). Speciation. Sinauer Associates, Sunderland, MA.Google Scholar
Eldon, B. (2009). Structured coalescent processes from a modified Moran model with large offspring numbers. Theoret. Popul. Biol. 76, 92104.Google Scholar
Ethier, S. N. and Kurtz, T. G. (1986). Markov Processes: Characterization and Convergence. John Wiley, New York.Google Scholar
Hanski, I. and Gilpin, M. E. (eds) (1997). Metapopulation Biology: Ecology, Genetics, and Evolution. Academic Press, San Diego, CA.Google Scholar
Herbots, H. M. (1997). The structured coalescent. In Progress in Population Genetics and Human Evolution, Springer, New York, pp. 231255.Google Scholar
Kelly, F. P. (1979). Reversibility and Stochastic Networks. John Wiley, Chichester.Google Scholar
Keymer, J. E., Marquet, P. A., Velasco-Hernández, J. X. and Levin, S. A. (2000). Extinction thresholds and metapopulation persistence in dynamic landscapes. Amer. Naturalist 156, 478494.Google Scholar
Kingman, J. F. C. (1982). The coalescent. Stoch. Process. Appl. 13, 235248.Google Scholar
Lambert, A. (2010). Population genetics, ecology and the size of populations. J. Math. Biol. 60, 469472.Google Scholar
Nordborg, M. and Krone, S. M. (2002). Separation of time scales and convergence to the coalescent in structured populations. In Modern Developments in Theoretical Population Genetics, Oxford University Press, pp. 194232.Google Scholar
Notohara, M. (1990). The coalescent and the genealogical process in geographically structured population. J. Math. Biol. 29, 5975.CrossRefGoogle ScholarPubMed
Notohara, M. (1993). The strong-migration limit for the genealogical process in geographically structured populations. J. Math. Biol. 31, 115122.Google Scholar
Takahata, N. (1988). The coalescent in two partially isolated diffusion populations. Genetical Res. 52, 213222.Google Scholar
Taylor, J. E. and Véber, A. (2009). Coalescent processes in subdivided populations subject to recurrent mass extinctions. Electron. J. Prob. 14, 242288.CrossRefGoogle Scholar