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Genetic diversity within the genus Trichinella as shown by cleavage fragment length polymorphism analysis

Published online by Cambridge University Press:  12 April 2024

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Abstract

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The genetic diversity within the genus Trichinella was studied using cleavage fragment length polymorphism (CFLP) analysis. The CFLP method generates specific fingerprints based on single nucleotide mutations. By this method the amplified intergenic regions of the 5S rRNA genes of the eight different genotypes of Trichinella were analysed. The CFLP pattern of T. spiralis was completely different compared with the sylvatic species T. britovi, T. nativa, T. nelsoni, and the genotypes Trichinella T5, Trichinella T6 and Trichinella T8. The T. pseudospiralis intergenic region can be differentiated by size from the other species of Trichinella.

Type
Research Article
Copyright
Copyright © Cambridge University Press 2001

References

Appleyard, G.D., Zarlenga, D., Pozio, E. & Gajadar, A.A. (1999) Differentiation of Trichinella genotypes by polymerase chain reaction using sequence specific primers. Journal of Parasitology 85, 556559.CrossRefGoogle ScholarPubMed
Bandi, C., La Rosa, G., Bardin, M.G., Daminiani, G., Comincini, S., Tasciotti, L. & Pozio, E. (1995) Random amplified polymorphic DNA fingerprints of the eight taxa of Trichinella and their comparison with allozyme analysis. Parasitology 110, 401407.CrossRefGoogle ScholarPubMed
Boyd, D., de Vos, T., Klassen, G. & Dick, T. (1989) Characterization of the ribosomal DNA from Trichinella spiralis . Molecular and Biochemical Parasitology 35, 6772.CrossRefGoogle ScholarPubMed
Brow, M.D., Oldenburg, M.C., Lyamichev, V., Heisler, L.M., Lyamicheva, N., Hall, J.G., Eagan, N.J., Olive, D.M., Smith, L.M., Fors, L. & Dahlberg, J.E. (1996) Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage. Journal of Clinical Microbiology 34, 31293137.CrossRefGoogle ScholarPubMed
Dame, J.B., Murrell, K.D., Worley, D.E. & Schad, G.A. (1987) Trichinella spiralis: genetic evidence of synanthropic subspecies in sylvatic hosts. Experimental Parasitology 64, 195203.CrossRefGoogle ScholarPubMed
Fukumoto, S., Takechi, M., Kamo, H. & Yamaguchi, T. (1987) Comparative studies on soluble protein profiles and isozyme patterns of seven Trichinella isolates. Parasitology Research 73, 352357.CrossRefGoogle ScholarPubMed
Fukumoto, S., Nagai, D., Yazaki, S., Kamo, H. & Yamaguchi, T. (1988) The molecular phylogenic tree of the genus Trichinella constructed from isozyme patterns. Parasitology Research 74, 574580.CrossRefGoogle ScholarPubMed
Klassen, G.R., Thiessen, J.P. & Dick, T.A. (1986) Restriction endonuclease analysis of repetitive sequences in the Trichinella genome: three strain-specific patterns. Journal of Parasitology 72, 772775.CrossRefGoogle ScholarPubMed
La, Rosa, G., Pozio, E., Rossi, P. & Murrell, K.D. (1992) Allozyme analysis of Trichinella isolates from various host species and geographical regions. Journal of Parasitology 78, 641646.CrossRefGoogle ScholarPubMed
La, Rosa, G., Tasciotti, L. & Pozio, E. (1993) DNA repetitive probes for the characterization and identification of Trichinella parasites Trichinellosis, Proceedings of the 8th International Conference on Trichinellosis.Google Scholar
Liu, L.X., Blaxter, M.L. & Shi, A. (1996) The 5S ribosomal RNA intergenic region of parasitic nematodes: variation in size and presence of SL1 RNA1. Molecular and Biochemical Parasitology 83, 235239.CrossRefGoogle Scholar
Marshall, D.J., Heisler, L.M., Lyamichev, V., Murvine, C., Oliver, D.M., Ehrlich, G.D., Neri, B.P. & de Arruda, M. (1997) Determination of hepatitis C virus genotypes in the United States by cleavase fragment length polymorphism analysis. Journal of Clinical Microbiology 35, 31563162.CrossRefGoogle ScholarPubMed
Nagano, I., Wu, Z., Matsua, A., Pozio, E. & Takahashi, Y. (1999) Identification of Trichinella by polymerase chain reaction-restriction fragment length polymorphism of the mitochondrial cytochrome c-oxidae subunit I gene. International Journal for Parasitology 29, 11131120.CrossRefGoogle ScholarPubMed
Penner, G.A., Bush, A., Wise, R., Kim, W., Domier, L., Kensha, K., Laroche, A., Scoles, G., Molnar, S.J. & Fedak, G. (1993) Reproducibility of Random Amplified Polymorphic DNA (RAPD) Analysis among Laboratories. PCR Methods and Applications 2, 341345.CrossRefGoogle ScholarPubMed
Pozio, E., La Rosa, G. & Rossi, P. (1989) Trichinella Reference Centre. Parasitology Today 5, 169170.CrossRefGoogle Scholar
Pozio, E., La Rosa, G., Rossi, P. & Murrell, K.D. (1992a) Biological characterization of Trichinella isolates from various host species and geographical regions. Journal of Parasitology 78, 647653.CrossRefGoogle ScholarPubMed
Pozio, E., La Rosa, G., Murrell, K.D. & Lichtenfels, J.R. (1992b) Taxonomic revision of the genus Trichinella . Journal of Parasitology 78, 654659.CrossRefGoogle ScholarPubMed
Pozio, E., Kapel, C.M.O. & Gamble, H.R. (1999) Specificity and sensitivity of random amplified polymorphic DNA analysis for the identification of single larvae of Trichinella after experimental infection of pigs. Parasitology Research 85, 504506.CrossRefGoogle ScholarPubMed
Rossetti, S., Englisch, S., Bresin, E., Pignatti, P.F. & Turco, A.E. (1997) Detection of mutations in human genes by a new rapid method: cleavage fragment length polymorphism analysis (CFLPA). Molecular and Cellular Probes 11, 155160.CrossRefGoogle ScholarPubMed
Sambrook, J., Fritsch, E.F. & Maniatis, T. (1989) Molecular cloning: a laboratory manual. a laboratory manual, 2nd edn. Cold Spring Harbor, New York, Cold Spring Harbor Laboratory Press.Google Scholar
Soulé, C., Guillou, J.-P., Dupouy-Camet, J., Vallet, C. & Pozio, E. (1993) Differentiation of Trichinella isolates by polymerase chain reaction. Parasitology Research 79, 461465.CrossRefGoogle ScholarPubMed
Wakelin, D. & Goyal, P.K. (1996) Trichinella isolates: parasite variability and host responses. International Journal for Parasitology 26, 471481.CrossRefGoogle ScholarPubMed
Wu, Z., Nagano, I. & Takahashi, Y. (1998) The detection of Trichinella with polymerase chain reaction (PCR) primers constructed using sequences of random amplified polymorphic DNA (RAPD) or sequences of complementary DNA encoding excretory-secretory (E-S) glycoproteins. Parasitology 117, 173183.CrossRefGoogle Scholar
Zarlenga, D.S., Al-Yaman, F., Minchella, D.J. & La Rosa, G. (1991) A repetitive DNA probe specific for a North American sylvatic genotype of Trichinella . Molecular and Biochemical Parasitology 48, 131138.CrossRefGoogle ScholarPubMed