Hostname: page-component-cd9895bd7-mkpzs Total loading time: 0 Render date: 2024-12-26T05:46:42.617Z Has data issue: false hasContentIssue false
  • English
  • Français

Collema fasciculare belongs in Arctomiaceae

Published online by Cambridge University Press:  07 May 2013

Mónica A. G. OTÁLORA  and
Mats WEDIN
Mónica A. G. OTÁLORA
Affiliation:
Cryptogamic Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden. Email: monica.garcia.otalora@gmail.com
Mats WEDIN
Affiliation:
Cryptogamic Botany, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden. Email: monica.garcia.otalora@gmail.com
Get access Rights & Permissions [Opens in a new window]

Abstract

The phylogenetic placement of Collema fasciculare (L.) F. H. Wigg, the most deviating species within Collema (Collemataceae, Lecanoromycetidae), was studied using maximum likelihood and Bayesian analysis of three molecular loci (mitochondrial SSU rDNA, and the protein-coding, nuclear RPB1 and MCM7 genes). Collema fasciculare belongs to Arctomiaceae (Ostropomycetidae) forming a strongly supported monophyletic group with members of Arctomia. The spores, paraphyses, asci and hymenial reactions in Collema fasciculare are similar to other Arctomia, but the ascoma ontogeny is somewhat different. Also C. leptosporum Malme, another species in the Fasciculare group, shows similarities with Arctomia regarding spores and asci. Arctomia is morphologically heterogeneous and the genus is in need of revision. Until then, the species of the Fasciculare group fit best in Arctomia s. lat. and the combinations Arctomia fascicularis (L.) Otálora & Wedin, Arctomia leptospora (Malme) Otálora & Wedin, Arctomia papuanarum (Degel.) Otálora & Wedin and Arctomia uviformis (Hue) Otálora & Wedin are proposed.

Keywords

Arctomiaascoma ontogenyCollemataceaecyanolichenslichenstaxonomy
Type
Articles
Information
The Lichenologist , Volume 45 , Issue 3 , May 2013 , pp. 295 - 304
Copyright
Copyright © British Lichen Society 2013

Access options

Get access to the full version of this content by using one of the access options below. (Log in options will check for institutional or personal access. Content may require purchase if you do not have access.)

References

Degelius, G. (1954) The lichen genus Collema in Europe: morphology, taxonomy, ecology. Symbolae Botanicae Upsalienses 13: 1–499.Google Scholar
Degelius, G. (1974) The lichen genus Collema with special reference to the extra–European species. Symbolae Botanicae Upsalienses 20: 1–215.Google Scholar
Ekman, S., Andersen, H. L. & Wedin, M. (2008) The limitations of ancestral state reconstruction and the evolution of the ascus in the Lecanorales (lichenized Ascomycota). Systematic Biology 57: 141–156.Google Scholar
Filson, R. B. (1992) Collema. Flora of Australia 54: 161–173.Google Scholar
Fries, T. M. (1860) Lichenes Arctoi Europae Groenlandiaeque Hactenus Cogniti. Uppsala: Leffler.Google Scholar
Henssen, A. (1965) A review of the genera of the Collemataceae with simple spores (excluding Physma). Lichenologist 3: 29–41.CrossRefGoogle Scholar
Henssen, A. (1969) Eine Studie uber die Gattung Arctomia . Svensk Botanisk Tidskrift 63: 126–138.Google Scholar
Henssen, A. & Jahns, H. M. (1973) (‘1974’) Lichenes. Eine Einführung in die Flechtenkunde. Stuttgart: Georg Thieme Verlag.Google Scholar
Henssen, A. & Kantvilas, G. (1985) Wawea fruticulosa, a new genus and species from the Southern Hemisphere. Lichenologist 17: 85–97.CrossRefGoogle Scholar
Henssen, A., Keuck, G., Renner, B. & Vobis, G. (1981) The lecanoralean centrum. In Ascomycete Systematics. The Luttrellian Concept. (Reynolds, D. R., ed): 138–234. New York, Heidelberg, Berlin: Springer-Verlag.Google Scholar
Hibbett, D. S., Binder, M., Bischoff, J. F., Blackwell, M., Cannon, P. F., Eriksson, O. E., Huhndorf, S., James, T., Kirk, P. M., Lücking, R., et al. (2007) A higher level phylogenetic classification of the Fungi. Mycological Research 111: 509–547.CrossRefGoogle ScholarPubMed
Hofstetter, V., Miądlikowska, J., Kauff, F. & Lutzoni, F. (2007) Phylogenetic comparison of protein-coding versus ribosomal RNA-coding sequence data: a case study of the Lecanoromycetes (Ascomycota). Molecular Phylogenetics and Evolution 44: 412–426.Google Scholar
Jørgensen, P. M. (2003) A new species of Arctomia from Sichuan Province, China. Lichenologist 35: 287–289.CrossRefGoogle Scholar
Jørgensen, P. M. (2007) Collemataceae. Nordic Lichen Flora 3: 14–42.Google Scholar
Katoh, K. & Toh, H. (2008) Improved accuracy of multiple ncRNA alignment by incorporating structural information into a MAFFT–based framework. BMC Bioinformatics 9: 212.Google Scholar
Kirk, P., Cannon, P. F., Minter, D. W. & Stalpers, J. A. (2008) Ainsworth & Bisby's Dictionary of the Fungi. 10th edn. Wallingford: CAB International.Google Scholar
Lumbsch, H. T. & Huhndorf, S. H. (2009) Myconet Volume 14. Fieldiana, Life and Earth Sciences 1: 1–64.Google Scholar
Lumbsch, H. T., Prado, R. & Kantvilas, G. (2005) Gregorella, a new genus to accommodate Moelleropsis humida and a molecular phylogeny of Arctomiaceae . Lichenologist 37: 291–302.Google Scholar
Lumbsch, H. T., Schmitt, I., Mangold, A. & Wedin, W. (2007) Ascus types are phylogenetically misleading in Trapeliaceae and Agyriaceae (Ostropomycetidae, Ascomycota). Mycological Research 111: 1133–1141.CrossRefGoogle ScholarPubMed
Lutzoni, F., Kauff, F., Cox, J. C., McLaughlin, D., Celio, G., Dentinger, B., Padamsee, M., Hibbett, D., James, T. Y., Baloch, E., et al. (2004) Assembling the fungal tree of life: progress, classification, and evolution of subcellular traits. American Journal of Botany 91: 1446–1480.CrossRefGoogle ScholarPubMed
Maddison, W. & Maddison, D. (2001) MacClade: Analysis of Phylogeny and Character Evolution, Version 4.01. Sunderland, Massachusetts: Sinauer Associates.Google Scholar
Magain, N. & Sérusiaux, E. (2012) A further new species in the lichen genus Arctomia: A. borbonica from Reunion (Mascarene archipelago). MycoKeys 4: 9–21.CrossRefGoogle Scholar
Mason–Gamer, R. J. & Kellogg, E. A. (1996) Testing for phylogenetic conflict among molecular data sets in the tribe Triticeae (Gramineae). Systematic Biology 45: 524–545.Google Scholar
Miądlikowska, J., Kauff, F., Hofstetter, V., Fraker, E., Grube, M., Hafellner, J., Reeb, V., Hodkinson, B. P., Kukwa, M., Lücking, R., et al. (2006) New insights into classification and evolution of the Lecanoromycetes (Pezizomycotina, Ascomycota) from phylogenetic analyses of three ribosomal RNA and two protein–coding genes. Mycologia 98: 1089–1102.Google Scholar
Miller, M. A., Pfeiffer, W. & Schwartz, T. (2010) Creating the CIPRES Science Gateway for inference of large phylogenetic trees. In Proceedings of the Gateway Computing Environments Workshop (GCE), 14 November, 2010, New Orleans, p. 1–8.Google Scholar
Muggia, L., Nelson, P., Wheeler, T., Yakovchenko, L. S., Tønsberg, T. & Spribille, T. (2011) Convergent evolution of a symbiotic duet: the case of the lichen genus Polychidium (Peltigerales, Ascomycota). American Journal of Botany 98: 1647–1656.CrossRefGoogle ScholarPubMed
Otálora, M. A. G., Martínez, I., Molina, M. C., Aragón, G. & Lutzoni, F. (2008) Phylogenetic relationships and taxonomy of the Leptogium lichenoides group (Collemataceae) in Europe. Taxon 57: 907–921.Google Scholar
Otálora, M. A. G., Aragón, G., Molina, M. C., Martínez, I. & Lutzoni, F. (2010) Disentangling the Collema–Leptogium complex through a molecular phylogenetic study of the Collemataceae (Peltigerales, lichen–forming Ascomycota). Mycologia 102: 279–290.CrossRefGoogle ScholarPubMed
Øvstedal, D. O. & Gremmen, N. J. M. (2001) The lichens of Marion and Prince Edward Islands. South African Journal of Botany 67: 552–572.Google Scholar
Øvstedal, D. O. & Gremmen, N. J. M. (2006) Lichens of sub-Antarctic Heard Island. South African Journal of Botany 72: 353–366.Google Scholar
Penn, O., Privman, E., Ashkenazy, H., Landan, G., Graur, D. & Pupko, T. (2010) GUIDANCE: a web server for assessing alignment confidence scores. Nucleic Acids Research 38: W23–W28.CrossRefGoogle ScholarPubMed
Posada, D. (2008) JModelTest: Phylogenetic Model Averaging. Molecular Biology and Evolution 25: 1253–1256.Google Scholar
Rambaut, A. (2009) FigTree v1.3.1. Edinburgh: Institute of Evolutionary Biology, University of Edinburgh. Available at http://tree.bio.ed.ac.uk/software/figtree/ Google Scholar
Rambaut, A. & Drummond, A. J. (2007) Tracer version 1.5. Edinburgh: University of Edinburgh. Available at http://beast.bio.ed.ac.uk/Main Google Scholar
Reeb, V., Lutzoni, F. & Roux, C. (2004) Contribution of RPB2 to multilocus phylogenetic studies of the euascomycetes (Pezizomycotina, Fungi) with special emphasis on the lichen-forming Acarosporaceae and evolution of polyspory. Molecular Phylogenetics and Evolution 32: 1036–1060.Google Scholar
Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M. A. & Huelsenbeck, J. P. (2011) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539–542.Google Scholar
Schmitt, I., Crespo, A., Divakar, P. K., Frankhauser, J. D., Herman–Sackett, E., Kalb, K., Nelsen, M. P., Rivas-Plata, E., Shimp, A. D., Widhelm, T., et al. (2009) New primers for promising single–copy genes in fungal phylogenetics and systematics. Persoonia 23: 35–40.Google Scholar
Spribille, T. & Muggia, L. (2012) Expanded taxon sampling disentangles evolutionary relationships and reveals a new family in Peltigerales (Lecanoromycetidae, Ascomycota). Fungal diversity 59: 1–14.Google Scholar
Stamatakis, A. (2006) RAxML–VI–HPC: maximum likelihood–based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688–2690.CrossRefGoogle ScholarPubMed
Stamatakis, A., Hoover, P. & Rougemont, J. (2008) A rapid bootstrap algorithm for the RAxML web servers. Systematic Biology 57: 758–771.CrossRefGoogle ScholarPubMed
Stiller, J. W. & Hall, B. D. (1997) The origin of red algae: implications for plastid evolution. Proceedings of the National Academy of Sciences 94: 4520–4525.CrossRefGoogle ScholarPubMed
Wedin, M., Wiklund, E., Crewe, A., Döring, H., Ekman, S., Nyberg, Å., Schmitt, I. & Lumbsch, H. T. (2005) Phylogenetic relationships of Lecanoromycetes (Ascomycota) as revealed by analyses of mtSSU and nLSU rDNA sequence data. Mycological Research 109: 159–172.CrossRefGoogle ScholarPubMed
Wedin, M., Wiklund, E., Jørgensen, P. M. & Ekman, S. (2009) Slippery when wet: phylogeny and character evolution in the gelatinous cyanobacterial lichens (Peltigerales, Ascomycetes). Molecular Phylogenetics and Evolution 53: 862–871.CrossRefGoogle ScholarPubMed
Wiens, J. J. (1998) Combining data sets with different phylogenetic histories. Systematic Biology 47: 568–581.Google Scholar
Zahlbruckner, A. (1925) Catalogus Lichenum Universalis Vol. 3. Leipzig: Borntraeger.Google Scholar
Zoller, S., Scheidegger, C. & Sperisen, C. (1999) PCR primers for the amplification of mitochondrial small subunit ribosomal DNA of lichen–forming ascomycetes. Lichenologist 31: 511–516.Google Scholar