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Genetic diversity and marker trait association for yield attributing traits in accessions of common bean (Phaseolus vulgaris L.) in India

Published online by Cambridge University Press:  04 October 2022

Chainika Gupta ,
Romesh Kumar Salgotra Open the ORCID record for Romesh Kumar Salgotra [Opens in a new window] ,
Raul Alvarez Venegas ,
Reetika Mahajan  and
Umang Koul
Chainika Gupta*
Affiliation:
School for Biotechnology, Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, Chatha, Jammu-180009 (J&K), India
Romesh Kumar Salgotra*
Affiliation:
School for Biotechnology, Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, Chatha, Jammu-180009 (J&K), India
Raul Alvarez Venegas
Affiliation:
CINVESTAV-IPN Unidad Irapuato, Km. 9.6 Libramiento Norte, Carretera Irapuato-Leon. C.P. 36821, Irapuato, Guanajuato, México
Reetika Mahajan
Affiliation:
Division of Plant Biotechnology, Sher-e-Kashmir University of Agricultural Sciences & Technology of Kashmir, Shalamar, Srinagar-190025 (J&K), India
Umang Koul
Affiliation:
School for Biotechnology, Sher-e-Kashmir University of Agricultural Sciences & Technology of Jammu, Chatha, Jammu-180009 (J&K), India
*
Author for correspondence: Romesh Kumar Salgotra, E-mail: rks_2959@rediffmail.com; Chainika Gupta, E-mail: cg2592@gmail.com
Author for correspondence: Romesh Kumar Salgotra, E-mail: rks_2959@rediffmail.com; Chainika Gupta, E-mail: cg2592@gmail.com
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Abstract

Common bean (Phaseolus vulgaris L.) is a highly economically important crop worldwide and a particularly important source of protein and minerals for people in less developed countries. Improving yield is a vital objective to meet the increasing demand for food due to the expanding human population. The present study was undertaken to study the genetic architecture of agronomic traits of common bean in India, particularly in the north-western Himalayan region. Marker-trait association (MTA) analysis was performed in a population of 100 common bean accessions using polymorphic microsatellite markers. Population structure analysis based on SSR markers divided the accessions into three main subpopulations. Ten significant MTAs were found using general linear model (GLM) and mixed linear model (MLM) approaches. We found two markers i.e. BM142 and J04555 associated with 100 seed weight and pods per plant common in both the GLM and MLM approach markers. All the MTAs were considered as major MTAs contributing more than 25% phenotypic variation. The significant quantitative trait loci identified in this study could be used in marker-assisted breeding to accelerate the genetic improvement of yield and development of high yielding common beans lines.

Keywords

Association mappingcommon beansgenetic diversitypopulation structureSSR markers
Type
Research Article
Information
Plant Genetic Resources , Volume 20 , Issue 2 , April 2022 , pp. 98 - 107
Copyright
Copyright © The Author(s), 2022. Published by Cambridge University Press on behalf of NIAB

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