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Genetic diversity analysis of a potato (Solanum tuberosum L.) collection including Chiloé Island landraces and a large panel of worldwide cultivars

Published online by Cambridge University Press:  14 August 2013

F. Esnault ,
J. Solano ,
M. R. Perretant ,
M. Hervé ,
A. Label ,
R. Pellé ,
J. P. Dantec ,
G. Boutet ,
P. Brabant  and
J. E. Chauvin
F. Esnault*
Affiliation:
INRA, UMR 1349 IGEPP, Keraïber, F-29260Ploudaniel, France
J. Solano
Affiliation:
Universidad Católica Temuco, Temuco, Chile
M. R. Perretant
Affiliation:
INRA, UMR 1095 GDEC, Site de Crouël, 234 Av. du Brézet, F-63100Clermont-Ferrand, France
M. Hervé
Affiliation:
INRA, UMR 1349 IGEPP, Plate-forme Biogenouest Génomique, Domaine de la Motte, F-35653Le Rheu, France
A. Label
Affiliation:
INRA, UMR 1349 IGEPP, Keraïber, F-29260Ploudaniel, France
R. Pellé
Affiliation:
INRA, UMR 1349 IGEPP, Keraïber, F-29260Ploudaniel, France
J. P. Dantec
Affiliation:
INRA, UMR 1349 IGEPP, Keraïber, F-29260Ploudaniel, France
G. Boutet
Affiliation:
INRA, UMR 1349 IGEPP, Plate-forme Biogenouest Génomique, Domaine de la Motte, F-35653Le Rheu, France
P. Brabant
Affiliation:
AgroParisTech, UMR 320, Le MoulonF-91190Gif sur Yvette, France
J. E. Chauvin
Affiliation:
INRA, UMR 1349 IGEPP, Keraïber, F-29260Ploudaniel, France
*
*Corresponding author. E-mail: florence.esnault@rennes.inra.fr
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Abstract

In order to investigate further the interest of using the Chilean gene pool in potato breeding programmes, the genetic diversity and population structure of a collection of Solanum tuberosum L. genotypes including 350 worldwide varieties or breeders' lines (referred to as the modern group) and 30 Chiloé Island landraces were examined using simple sequence repeat markers. The close genetic proximity of the Chiloé Island landraces to the modern group was confirmed using several structure analysis methods: principal coordinate analysis; hierarchical clustering analysis; analysis of molecular variance; Bayesian model-based clustering analysis. The latter analysis, in particular, revealed no clear genetic structure between the modern group and the Chiloé Island landraces. The Chiloé Island germplasm appears to represent an interesting gene pool that could be exploited in potato breeding programmes using an association mapping approach.

Keywords

Chiloé Island landracesgenetic diversitymodern potato cultivarspopulation structureSolanum tuberosum L
Type
Research Article
Information
Plant Genetic Resources , Volume 12 , Issue 1 , April 2014 , pp. 74 - 82
Copyright
Copyright © NIAB 2013 

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