The hypothesis that dichromatic behavior on a clinical anomaloscope
can be explained by the complement and arrangement of the long- (L) and
middle-wavelength (M) pigment genes was tested. It was predicted that
dichromacy is associated with an X-chromosome pigment gene array
capable of producing only a single functional pigment type. The
simplest case of this is when deletion has left only a single
X-chromosome pigment gene. The production of a single L or M pigment
type can also result from rearrangements in which multiple genes
remain. Often, only the two genes at the 5′ end of the array are
expressed; thus, dichromacy is also predicted to occur if one of these
is defective or encodes a defective pigment, or if both of them encode
pigments with identical spectral sensitivities. Subjects were 128 males
who accepted the full range of admixtures of the two primary lights as
matching the comparison light on a Neitz or Nagel anomaloscope.
Strikingly, examination of the L and M pigment genes revealed a
potential cause for a color-vision defect in all 128 dichromats. This
indicates that the major component of color-vision deficiency could be
attributed to alterations of the pigment genes or their regulatory
regions in all cases, and the variety of gene arrangements associated
with dichromacy is cataloged here. However, a fraction of the
dichromats (17 out of 128; 13%) had genes predicted to encode pigments
that would result in two populations of cones with different spectral
sensitivities. Nine of the 17 were predicted to have two pigments with
slightly different spectral peaks (usually ≤ 2.5 nm) and eight had
genes which specified pigments identical in peak absorption, but
different in amino acid positions previously associated with optical
density differences. In other subjects, reported previously, the same
small spectral differences were associated with anomalous trichromacy
rather than dichromacy. It appears that when the spectral difference
specified by the genes is very small, the amount of residual
red–green color vision measured varies; some individuals test as
dichromats, others test as anomalous trichromats. The discrepancy is
probably partly attributable to testing method differences and partly
to a difference in performance not perception, but it seems there must
also be cases in which other factors, for example, cone ratio,
contribute to a person's ability to extract a color signal from a
small spectral difference.