Research on the biology and ecology of cold-water corals (CWCs) is still in its infancy.The growth patterns of CWCs in their natural environments are poorly known. Growth rateinvestigations on these deep-sea reef builder species are needed to predict recovery timesfollowing damage to their ecosystems. This study investigates a new approach for analysingCWC growth rate, suitable for in situ application. Lopheliapertusa and Madrepora oculata (Scleractinian) were collectedfrom the Lacaze-Duthiers canyon in the northwestern Mediterranean Sea (520 m depth),marked and then either redeployed in situ for 6 months, or maintained inaquaria for growth rate comparison at a constant temperature of 13 °C, corresponding totheir habitat conditions. Two different types of staining (calcein and manganese) andthree different exposure times (30, 60 and 240 min) were tested. The results show thatcalcein offers rapid incorporation and easy detection, making it particularly suitable forskeletal growth rate investigations compared with other chemical staining. In situlinear polyp growth rates of 7.5 ± 1.2 mm y-1 and 3.5 ± 2.1 mmy-1 were measured in new polyps of L. pertusa and M.oculata, respectively. Those values were significantly higher in young polypsthan in older ones, where they decreased to 1.3 ± 1.5 mm y-1 and 1.2 ± 1.2 mmy-1. Beyond the study of coral reef growth processes, this approach offers amethodological basis for habitat quality assessment which could be used in the managementof deep-sea marine protected areas (MPA).