Even with intensive sampling effort, data often remain sparse when estimating population density of elusive species such as the Sunda clouded leopard Neofelis diardi. An inadequate number of recaptures can make it difficult to account for heterogeneity in detection parameters. We used data from large-scale camera-trapping surveys in three forest reserves in Sabah, Malaysian Borneo, to (1) examine whether a high-density camera-trap network increases the number of recaptures for females, which tend to be more difficult to detect, thus improving the accuracy of density estimates; (2) compare density estimates from models incorporating individual heterogeneity in detection parameters with estimates from the null model to evaluate its potential bias; and (3) investigate how the size of the camera-trap grid affects density and movement estimates. We found that individual heterogeneity could not be incorporated in the single-site data analysis and only conservative null model estimates could be generated. However, aggregating data across study sites enabled us to account for individual heterogeneity and we estimated densities of 1.27–2.82 individuals/100 km2, 2–3 times higher than estimates from null models. In light of these findings, it is possible that earlier studies underestimated population density. Similar densities found in well-managed forest and recently selectively logged forest suggest that Sunda clouded leopards are relatively resilient to forest disturbances. Our analysis also revealed that camera-trapping grids for Sunda clouded leopard density estimations should cover large areas (c. 250 km2), although smaller grids could be appropriate if density or detectability are higher.

Habitat prioritization and corridor restoration are important steps for reconnecting fragmented habitats and species populations, and spatial modelling approaches are useful in identifying suitable habitat for elusive tropical rainforest mammals. The Endangered Bornean banteng Bos javanicus lowi, a wild bovid endemic to Borneo, occurs in habitat that is highly fragmented as a result of extensive agricultural expansion. Based on the species’ historical distribution in Sabah (Malaysia), we conducted camera-trap surveys in 14 forest reserves during 2011–2016. To assess suitable habitat for the banteng we used a presence-only maximum entropy (MaxEnt) approach with 11 spatial predictors, including climate, infrastructure, land cover and land use, and topography variables. We performed a least-cost path analysis using Linkage Mapper, to understand the resistance to movement through the landscape. The surveys comprised a total of 44,251 nights of camera trapping. We recorded banteng presence in 11 forest reserves. Key spatial predictors deemed to be important in predicting suitable habitat included soil associations (52.6%), distance to intact and logged forests (11.8%), precipitation in the driest quarter (10.8%), distance to agro-forest and regenerating forest (5.7%), and distance to oil palm plantations (5.1%). Circa 11% of Sabah had suitable habitat (7,719 km2), of which 12.2% was in protected forests, 60.4% was in production forests and 27.4% was in other areas. The least-cost path model predicted 21 linkages and a relatively high movement resistance between core habitats. Our models provide information about key habitat and movement resistance for bantengs through the landscape, which is crucial for constructive conservation strategies and land-use planning.

Largely as a result of the expansion of oil palm Elaeis guineensis, forest fragmentation has occurred on a large scale in Borneo. There is much concern about how forest-dependent species, such as the Vulnerable sun bear Helarctos malayanus, can persist in this landscape. The absence of sufficient natural food in forest fragments could drive sun bears into oil palm plantations, where they risk coming into conflict with people. We interviewed oil palm plantation workers and farmers in the Lower Kinabatangan region of Sabah, Malaysian Borneo, to ascertain if sun bears were utilizing plantations, if they were causing damage to the crop, and how the bears were perceived by people. To obtain a comparative baseline we extended these questions to include other species as well. We found that bears were rarely encountered in plantations and were not considered to be destructive to the oil palm crop, although they were generally feared. Other species, such as macaques Macaca spp., bearded pigs Sus barbatus, and elephants Elephas maximus, had more destructive feeding habits. Sun bears could use this readily available food resource without being targeted for retribution, although incidental human-related mortality remains a risk. Although bears could gain some nutritional benefit from oil palm, plantations do not provide the diversity of food and cover available in a natural forest.

Over a 10-year period, a valley in Crocker Range Park in Sabah (Malaysia) has witnessed a conflict between a community located inside its boundaries – the Ulu Senagang/Mongool Baru – and the state government's parks department – Sabah Parks. Sabah Parks sought to designate the area as a co-managed community use zone (CUZ) in which sustainable practices are allowed to continue, but disagreement over how the zone was to be governed resulted in a prolonged impasse. This paper assesses whether conflict management tools could overcome the impasse. This study assessed the CUZ conflict via a systematic methodology known as ethical analysis (EA), which aims to reveal stakeholder interests, values and principles and identify barriers and bridges to negotiated settlements. First developed in the medical field and subsequently employed in the analysis of forestry disputes, this is the first time that EA has been utilized in the context of protected area management. The EA revealed significant misalignments between stakeholders’ positions that were sufficient to prevent a perfect win–win solution from emerging. As such, at least one party would have to make compromises in order for the CUZ to be established. The EA revealed that whilst both sides in this conflict were willing to move forwards with negotiations, they had been prevented from doing so by mutual mistrust and a number of misconceptions that had developed during the negotiation process. The EA tool was fit for purpose in identifying the underlying causes of the CUZ conflict, which were determined to be resolvable so long as both sides were willing to make compromises. The study concludes that other co-managements could similarly benefit from the employment of EA, which can be easily incorporated into existing protected area conflict management models and structures. We propose that the utility of EA can be further enhanced in the conservation management context by incorporating assessments of stakeholder priorities and worldviews into its analysis structure.

The responses of plants to shade and foliar herbivory jointly affect growth rates and community assembly. We grew 600 seedlings of ten species of the economically important Dipterocarpaceae in experimental gradients of shading (0.3–47.0% of full sunlight) and defoliation (0, 25%, 50% or 75% of leaf area removed). We assessed stem diameters initially, after 2 and 4 mo, and calculated relative growth rates (RGR) with a linear model. Shading interacted with defoliation, reducing RGR by 21.6% in shaded conditions and 8.9% in well-lit conditions. We tested three hypotheses for interspecific trade-offs in growth responses to shading and defoliation. They could be positively related, because both reduce a plant's access to carbon, or inversely related because of trade-offs between herbivore resistance and tolerance. We observed, however, that species varied in their response to shading, but not defoliation, precluding an interspecific trade-off and suggesting that plants tolerate shade and herbivory with differing strategies. Shading most strongly reduced the growth of species with less-dense wood and larger seeds. The strong and variable growth responses to shade, contrasted with the weak and uniform responses to defoliation, suggest that variation in light availability more strongly affects the growth of tropical tree seedlings, and thus community assembly, than does variation in herbivory.

Population density is an important parameter for monitoring and guiding conservation of small or threatened wildlife populations. Yet, despite the Vulnerable status of both species of clouded leopard Neofelis spp., and their disappearing tropical forest habitat, information on their population density is lacking from across their broad geographic ranges. Here we estimated population density of the Sunda clouded leopard N. diardi in the Maliau Basin Conservation Area in Sabah, Malaysian Borneo, one of the first such estimates for either species of clouded leopard. With 25 camera-trap stations, each operated for at least 81 trap-nights, we obtained 59 detections of four individual Sunda clouded leopards in undisturbed primary rainforest but only a single detection in logged forest, despite similar sampling effort. Using spatially-explicit mark–recapture models, we estimated a density of 1.9 individuals per 100 km2 (95% confidence interval 0.7–5.4) for primary forest and 0.8 per 100 km2 (0.2–2.6) for the entire study area (including logged forest). These results will contribute to a better understanding of clouded leopard status and serve as a reference for future assessments of the species.

Previous studies in Sundaland (Borneo, Sumatra, Java and Peninsular Malaysia) have shown that termite assemblages in natural forests have a characteristic structure. These typical forest assemblages contain many soil-feeding species. However, this study investigated four natural forest sites in Borneo with depauperate termite assemblages, and compared their soils with soils from four other sites that have typical termite assemblages. In contrast to the typical assemblages, the four depauperate assemblages all have low species density (<35%), low relative abundance (<30%), a virtual absence of soil-feeders, significantly fewer wood-feeders, and a near-absence of species of Rhinotermitidae, Amitermes-group, Termes-group, Pericapritermes-group and Oriensubulitermes-group. The depauperate sites are on ultramafic-derived soils and have significantly higher concentrations of calcium, magnesium, nickel, chromium, cobalt, copper and zinc compared with the non-ultramafic soils at sites with typical assemblages. In addition, soil pH at the depauperate sites is significantly higher (>pH 5.4) compared with soils at the typical sites (which are all below pH 4.7). Possible mechanisms to explain the depauperate termite assemblages on ultramafic soils include metal toxicity, high pH disrupting gut physiology, and microbial interactions with metals.

Numbers of lianas ≥2 cm gbh were recorded on trees ≥30 cm gbh in two 4 ha plots of dipterocarp forest. Associations between lianas and trees of the 12 commonest families and 16 commonest species were analysed. Liana density was 882 ha-1. Fifty-seven per cent of trees supported lianas and the mean number lianas per tree was 2.1. Lianas were highly aggregated on individual trees in most families; numbers of lianas per tree followed the negative binomial distribution for the Dipterocarpaceae but not Euphorbiaceae. Dipterocarpaceae and Euphorbiaceae differed in susceptibility, with 41 and 64% of their trees respectively supporting lianas. The proportions of trees with lianas (i.e. % trees laden) were correlated between plots at the species, but not the family, level. They were not related to tree girth; differences in proportions between families and species were maintained for trees in the 30–40 cm gbh class. At the species level, proportions of trees with lianas and the mean number of lianas per tree were significantly inversely correlated with mean branch-free bole height of trees in the 30–40 cm gbh class. Increased branch-free bole height and associated branch shedding may therefore decrease the susceptibility of trees to lianas and explain the lower susceptibility in the Dipterocarpaceae than the Euphorbiaceae.

The numbers and biomass of litter and soil invertebrate fauna were investigated in six plots at altitudes of 280 m, 330 m, 480 m, 610 m, 790 m and 870 m on Gunung Silam, Sabah, East Malaysia. There were relatively high numbers and biomass in the lower plots, where the Oligochaeta were a high proportion of the total invertebrate biomass. The biomass of other invertebrate groups was low in the soil. There was a marked effect of altitude, particularly for the Oligochaeta above 610 m. The low biomass of the Oligochaeta in the higher plots suggested that the importance of this group may be diminished at relatively low altitudes on small mountains. However, several other soil faunal groups showed no evidence of an altitudinal effect, and it is suggested that the stunted forests near the summits of small mountains such as Gunung Silam may have a different litter and soil fauna from forests of a similar physiognomy at high elevations on large mountains.

Effects of tree species heterogeneity on leaf fall were studied in a primary (4 ha) and in a selectively logged forest plot (2.5 ha) in the Ulu Segama Forest Reserve, Sabah, Malaysia, from April 1988 to December 1989. Leaf fall was collected at 30 sampling points in each plot, and identified to species.

Dipterocarpaceae, Euphorbiaceae, Lauraceae, Fagaceae and Meliaceae are important tree families in both plots with regard to their contribution to total basal area, tree density and annual leaf fall. The total number of tree species was higher in the primary forest plot (267) than in the logged forest plot (218), although the number of climber species was higher in the logged forest (44) than in the primary forest plot (33). The overlap in species composition between the two forest plots was relatively small (49%) compared with that in family composition (88%).

In the primary forest plot, the Dipterocarpaceae contributed 29% of the total basal area and 34% of the annual leaf fall. In the logged forest plot these contributions were much lower, 11% and 15%. The contribution to annual leaf fall made by climbers and pioneer trees was higher in the logged forest plot (34%) than in the primary forest plot (8%).

In the primary forest plot, leaf fall was dominated My large emergent and main canopy trees, mainly dipterocarps, and occurred as regular large peaks. In the logged forest leaf fall was dominated by climbers and many, relatively small trees of pioneer species, such as Macaranga hypoleuca, and was more evenly distributed in time.

A total of 14 spotlight surveys were carried out from January 1992 to February 1993 along 37 km of the Klias River in north-western Sabah, Malaysia. Surveys were at low tide between 1900 and 0600 h from a survey boat at 15 km h−1 by two observers. A total of 221 sightings were made, which varied between 2 and 29 per survey (mean 15.8). A total of 55 juvenile crocodiles were captured, with 16 recaptures. Calculated density was 0.9–1.8 individuals km−1, while the estimated crocodile population was 46.1 ± 10.2 (SD) for the survey area. Percentage sightings according to total length were: 42% ≤0.5 m; 40% >0.5-≤1.0 m; 5% > 1.0-≤3.0; and 13% eyes only. Recapture of 16 tagged juveniles suggested that hatchlings ≤0.5 m total length remained within >0.5 km of their release point for at least one month, and juveniles 0.5-≤1.0 m more than one year. Hatchlings had growth rates between 0.01 and 0.08 cm d−1 and 0.3 and 1.5 g d−1, while larger juveniles grew at least 0.11 cm d−1 and 2.7–2.9 g d−1. Stomachs of hatchlings and juveniles contained crabs (Ocypodidae), prawns (Atyidae), insects and small fish (Hemiramphidae). Relatively large numbers of juvenile Crocodylus porosus (82.4%) in the Klias River suggests that the area, though under hunting pressure, is desirable as a site for the conservation of C. porosus in the Sabah.

The magnitude and sustainability of incidental catches of marine mammals in fisheries was investigated in Sabah and Sarawak, East Malaysia, using a combination of interview surveys and observer trips on fishing boats. These fisheries involve around 15,000 registered fishing boats and generate annual landings of around 350,000 tonnes. Between March 1997 and December 2004, we interviewed fishermen working on 753 and 358 boats in Sabah and Sarawak, respectively, who were employing trawl nets, purse seines, gillnets and fish stakes. They were asked questions about sightings of marine mammals and interactions with fishing. We also followed 36 trawl and 10 purse seine fishing trips in Sabah between June 2003 and December 2004. Fishing was conducted in coastal waters and total annual catches by each method and region were estimated. Incidental catches of marine mammals were reported by fishermen from 310 (41%) and 99 (28%) fishing boats in Sabah and Sarawak, respectively. Gill-netters, trawlers and fish stakes were reported to catch cetaceans and dugongs, while purse seiners caught only cetaceans. The Irrawaddy dolphin, bottlenose dolphin, spinner dolphin, pantropical spotted dolphin, Indo-Pacific humpback dolphin and finless porpoise are the cetacean species known to be taken. Overall, the magnitude of incidental catches of marine mammals is greatest in gillnets. No marine mammal catches were seen during observer trips. Interview results suggest annual by-catches of 306 (95% CI = 250–369) cetaceans and 479 (95% CI = 434–528) dugongs in Sabah. Estimates for Sarawak were 221 (95% CI = 189–258) cetaceans per year and 14 (95% CI = 2–30) dugongs. These results suggest that by-catch rates, particularly in gillnets, may be unsustainably high. A dedicated monitoring and educational programme, together with the establishment of Marine Protected Areas, is urgently needed to minimize the threat.

Dipterocarp seedling populations arising from a 1996 mast fruiting in closed-canopy primary lowland rain forest in Sabah, Malaysia, were monitored through the 1997-8 El Niño event to investigate the effects of drought and other factors on dipterocarp regeneration. Of particular interest was the influence of herbivory and its relation to drought, since water stress is known to influence herbivore performance. For seedlings with less than 10% leaf damage, mortality during a 6-mo period spanning the driest part of the drought was three times higher than mortality in the previous and subsequent 6-mo periods (∼10% vs. ∼30%). Leaf production was also higher during this period. Survival was positively related to leaf number and negatively related to leaf damage. Dryobalanops lanceolata was the tallest and leafiest species, and had low levels of leaf damage. Depending on sample period, abscission of leaves with more than 50% damage was between two and three times more likely than those with less than 10% damage. Mortality of seedlings defoliated by more than 50% was around twice that of seedlings defoliated by less than 10%. However, fewer than 10% of seedlings were defoliated by more than 50% at any time. The effect of defoliation did not seem to be altered by drought. Defoliation levels increased after the drought, perhaps due to a resurgence of insect populations. Drought may become a more important influence on dipterocarp regeneration in future, since El Niño events are thought to be increasing in frequency.

Two new species of Aeschynanthus from Borneo, A. argentii Mendum and A. pseudohybridus Mendum, and one from Palawan (Philippines), A. batakiorum Mendum & Madulid, are described and illustrated.