Stomach contents were analysed from 23 cetaceans, including individuals of 12 species from the families Delphinidae, Physeteridae, Kogiidae and Ziphiidae, stranded between 1996 and 2006 in the Canary Islands. Cephalopod mandibles (beaks) were found in 21 stomachs and fish remains (otoliths and jaw bones) appeared in 4 stomachs. Two stomachs contained only eye lenses. Cephalopods eaten by dolphins were mainly from the families Ommastrephidae, Sepiidae and Enoploteuthidae, whereas whales had mainly taken specimens of the oceanic squid families Histiotheutidae and Cranchiidae. Fish remains included a pelagic species (i.e. garfish, Belone belone) in dolphin stomachs and bathypelagic (i.e. black scabbard fish, Aphanopus carbo, lantern fish, Lampadena luminosa) and demersal species (Lophius sp.) in a pygmy sperm whale (Kogia breviceps) stomach. Most of the prey species identified are not of commercial interest but one of the sperm whales (Physeter macrocephalus) contained a fishing hook among the stomach contents. Five (22%) of the cetaceans examined had also plastic debris in their stomachs, with big plastic items being taken by deep diving teuthophagous whales.

During satellite tagging of harbour porpoises (Phocoena phocoena), heart rate, respiration rate and cortisol value were measured to evaluate stress effects during handling and tagging. Respiration rates were obtained using video recordings, heart rates were recorded and serum cortisol levels were analysed from blood samples. Differences in heart rates, respiration rates and cortisol levels before and during the tagging events were investigated. An overall significant decrease of 31.5% in respiration rate was found during the tagging event period, while mature porpoises respired significantly more often than immature individuals. Though significant differences in heart rates were found for some individuals, no general significant change for all animals was detected. We found no correlation between cortisol concentration and either heart rate or respiration rate, nor did we find any relationships between cortisol and month of year, sex and body length. As high individual variations occurred in response to tagging of harbour porpoises, it is not possible to give general advice based on the factors investigated, on how to reduce stress during handling. However, pouring water over the animal and lowering it into the water seem to stabilize a stressed animal. Therefore, general precaution and individual judgement based on experience is essential when handling wild harbour porpoises.

We examined the tooth ultra-structure of harbour porpoises (Phocoena phocoena) from Scottish waters to determine whether the incidence of mineralization anomalies could be related to certain life history events (e.g. the achievement of sexual maturation) as well as other factors that affect the general health of the individual (e.g. persistent organic pollutant (POP) concentrations in blubber). Five distinct types of mineralization anomalies were recorded: accessory lines, marker lines, dentinal resorption, cemental disturbance and pulp stones and the occurrence of these anomalies was scored by sex, age and maturity state. Overall, the incidence of mineralization anomalies was high and tended to increase with age. Marker lines and accessory lines were the most commonly recorded anomalies while pulp stones were least frequent. Duplicate teeth (i.e. from the same individual) always showed the same pattern of anomaly occurrence.

Fitted binary generalized linear and additive models indicated that the presence of dentinal resorption, cemental disturbance and marker lines in harbour porpoise teeth increased with age, body length and maturity. Males displayed marker lines more frequently than females. Age was the best predictor of the incidence of dentinal resorption and cemental disturbance while age and sex were the best predictors of the incidence of marker lines. The time course of appearance of dentinal resorption and cemental disturbance suggests that their occurrence could be related to physiological stress linked to sexual maturation. Marker lines were found within growth layer groups which coincided with the beginning of weaning and sexual maturation, suggesting an association with these two major life history events. Accessory lines were found in most teeth and may be a normal characteristic of porpoise teeth or reflect regular events. Pulp stones appeared only in mature animals. We found no evidence that the presence of anomalies in teeth was significantly related to POP concentrations in the blubber.

A comparison between the diet of the franciscana and the boto-cinza is presented through the proximate-composition and caloric value of their main prey. The fish Stellifer cf. rastrifer, Pellona harroweri, Anchoa filifera, Isopisthus parvippinnis and Trichiurus lepturus and the squids Loligo sanpaulensis and L. plei were analysed for water, protein, lipid and mineral contents and gross energy (GE). The fish are more important in the diet of the boto-cinza and squids are consumed mostly by the franciscana. Loligo sanpaulensis had the higher water content and protein was the largest fraction of the organic matter in all prey species. Squids presented greater GE values than fish. The data on prey composition and energy from this study are the first for these South American dolphins.

The magnitude and sustainability of incidental catches of marine mammals in fisheries was investigated in Sabah and Sarawak, East Malaysia, using a combination of interview surveys and observer trips on fishing boats. These fisheries involve around 15,000 registered fishing boats and generate annual landings of around 350,000 tonnes. Between March 1997 and December 2004, we interviewed fishermen working on 753 and 358 boats in Sabah and Sarawak, respectively, who were employing trawl nets, purse seines, gillnets and fish stakes. They were asked questions about sightings of marine mammals and interactions with fishing. We also followed 36 trawl and 10 purse seine fishing trips in Sabah between June 2003 and December 2004. Fishing was conducted in coastal waters and total annual catches by each method and region were estimated. Incidental catches of marine mammals were reported by fishermen from 310 (41%) and 99 (28%) fishing boats in Sabah and Sarawak, respectively. Gill-netters, trawlers and fish stakes were reported to catch cetaceans and dugongs, while purse seiners caught only cetaceans. The Irrawaddy dolphin, bottlenose dolphin, spinner dolphin, pantropical spotted dolphin, Indo-Pacific humpback dolphin and finless porpoise are the cetacean species known to be taken. Overall, the magnitude of incidental catches of marine mammals is greatest in gillnets. No marine mammal catches were seen during observer trips. Interview results suggest annual by-catches of 306 (95% CI = 250–369) cetaceans and 479 (95% CI = 434–528) dugongs in Sabah. Estimates for Sarawak were 221 (95% CI = 189–258) cetaceans per year and 14 (95% CI = 2–30) dugongs. These results suggest that by-catch rates, particularly in gillnets, may be unsustainably high. A dedicated monitoring and educational programme, together with the establishment of Marine Protected Areas, is urgently needed to minimize the threat.

Conflict between dolphins and fisheries is an important management issue in many parts of the world. In 2002, we examined the extent of depredation in the Italian small scale fishery by means of in situ interviews. Overall, 245 landing sites were investigated, representing 11.09% of the whole Italian artisanal fleet. The association between the commonly used artisanal fishing gear and the interacting fauna was investigated by means of correspondence analysis. Set gillnet and trammel nets were the types of the fishing gear most vulnerable to dolphin depredation; the interaction with these gear amounted to 66.4% while fish damage was reported in 72.2% of the cases. A regional ranking of the interactions in terms of both fishing gear alteration and fish damage, shows that the problem is most pressing in the Friuli, Campania, Sardinia and Apulia regions. This study is the first attempt to monitor dolphin–fisheries interactions and assess depredation rates in Italy, providing information on the areas where future investigation should be concentrated.

Small boat surveys were organized to study cetaceans of the Marquesas (9°S and 140°W) and the Society Islands (17°S and 150°W) in French Polynesia. Prospecting took place from 12–15 m sailboats, between 1996 and 2001 with systematic visual searching. Boats moved according to sea conditions, at a mean speed of 10 km/h. Effective effort of 4856 km in the Marquesas and 10,127 km in the Societies were logged. Relative abundance indices were processed for odontocetes using data obtained with Beaufort 4 or less. In the Marquesas, 153 on-effort sightings were obtained on 10 delphinids species including the spotted dolphin, spinner dolphin, bottlenose dolphin, melon-headed whale and rough-toothed dolphin. In the Societies, 153 sightings of 12 odontocetes included delphinids (spinner, rough-toothed and bottlenose dolphins, short-finned pilot and melon-headed whales, Fraser's dolphin, Risso's dolphin and pygmy killer whale) and two species of beaked whales, the sperm whale and dwarf sperm whale. Relative abundance indices were higher in the Marquesas than in the Societies both inshore (0.93 ind/km2 against 0.36 ind/km2) and offshore (0.28 ind/km2 against 0.14 ind/km2). Differences in remote-sensed primary production were equally important, the Marquesas waters featuring an annual average of 409 mgC.m−2 · day−1 and the Societies of only 171 mgC · m−2 · day−1. The presence of a narrow shelf around the Marquesas also accounted for differences in odontocete populations, in particular the delphinids.

The patterns of habitat use by the franciscana dolphins (Pontoporia blainvillei) along its distribution are poorly known. This study investigates the patterns of habitat use with respect to depth for 181 individuals of different age, size, gender and reproductive condition off Rio Grande do Sul, southern Brazil. The results reveal that franciscanas are very homogeneously distributed according to depth. Individuals from all lengths utilize nearly the entire range of depths of the surveyed area. Larger or older animals do not use deeper waters than younger animals, indicating that body size and age are not limiting factors for franciscanas that occupy deeper or offshore waters. Gestation seems to not cause a change in the distribution of females. Although the sex-ratio of the overall data did not vary from 1:1 in different depth intervals, a small-scale comparison between the northern and southern coast demonstrated the existence of some kind of sexual segregation. Franciscana by-catch in Rio Grande do Sul is not sustainable and it is agreed that management procedures are needed. Nevertheless, the available data on species distribution do not allow the designing of a protected area in order to minimize the by-catches of a particular sex/reproductive class.

A decline in white-beaked dolphins Lagenorhynchus albirostris had been reported in the Minch (Scotland, UK) since the 1990s, coinciding with an increasing occurrence of short-beaked common dolphins Delphinus delphis. This has led to suggestions that rising seawater temperatures are causing D. delphis to out-compete and exclude L. albirostris in this region. A total of 793 km (66.3 hours) of survey data were collected in the Minch during August 2007, to examine fine-scale habitat selection by L. albirostris and D. delphis and investigate whether their ecological overlap is sufficient to result in interspecific competition and/or habitat partitioning. Ten sightings of L. albirostris (70 animals) were recorded in a relatively small spatial area in the northern Minch. In contrast, the eleven sightings of D. delphis (1486 animals) were more widely distributed. The relative abundance per 1/4 ICES rectangle ranged from 0.41 to 0.53 animals/km for L. albirostris and 0.13 to 6.68 animals/km for D. delphis. The mean group size and group body mass were higher for D. delphis than for L. albirostris indicating D. delphis as the dominant delphinid in the Minch during August. Lagenorhynchus albirostris occurred in waters significantly deeper and further from shore than D. delphis, suggesting interspecific differences in preferred habitat. Most dolphin schools were recorded as foraging/feeding. Behaviour and seabird associations indicated that the two species differed in diet and/or foraging strategy, with L. albirostris foraging sub-surface and D. delphis exhibiting surface-feeding with associated gannets Morus bassanus. This is consistent with published information on the stomach contents of Scottish animals. The results suggest that there are subtle differences in habitat selection and diet between these two species, which may enable L. albirostris and D. delphis to coexist in the Minch. Whether these differences result from niche partitioning arising from previous/ongoing interspecific competition or are the result of genuine differences in the habitat preferences of each species, remains unclear.

The large majority of cetacean interspecific studies report only on dolphin interactions, while studies on interactions between odontocete and mysticete are less common. The present work aims to report on sightings of cetacean interactions, during the breeding season of humpback whales (Megaptera novaeangliae), along 370 km of the Bahia State, north-eastern Brazil, addressing aspects of cetacean distribution and behaviour. During 7 seasons (2000–2006), a total of 230 research cruises were performed, in which 38 events of interactions among humpback whales and other cetaceans (Tursiops truncatus, Steno bredanensis, Peponocephala electra and Balaenoptera acutorostrata) were observed, plus another 5 encounters without the whale's presence, including T. truncatus, S. bredanensis, P. electra, Stenella clymene and Stenella attenuata. Our results confirm the occurrence of multiple cetacean species in the Bahia State, being the first study in the world to report on a large range of interactions involving another 4 cetacean species, grouped with up to 3 mixed species per sighting, with humpback whales in their annual breeding ground.

Between August 2005 and July 2007, 376 Guiana dolphin (Sotalia guianensis) encounters were documented in Sepetiba Bay. For the purpose of this study all dolphin sightings were classified as groups or aggregations. Groups (N = 268, x = 20, range = 1–90) consisted of dolphins in apparent association usually engaged in the same behaviour and moving in the same direction. Aggregations (N = 108, x = 204, range = 100–450) consisted of temporal association of numerous groups gathered in an area, totalling several hundred individuals usually engaged in the same behaviour but not necessarily moving in the same direction. Guiana dolphin groups and aggregations differed significantly in behavioural activity, spatial and temporal distribution and age composition. Most aggregated dolphins were engaged in foraging/feeding activities and primarily located at the interior of the bay, and also, aggregations were more likely recorded during morning hours and had more neonates and calves present when compared to groups. The plotted GPS records of aggregations formed two distinct clusters of distribution within the bay, indicating potential areas where conservation strategies could be implemented.

Intra-specific variation in social organization provides valuable insights into the selective forces driving social evolution. Sperm whales are distributed globally and live far from shore, thus obtaining large sample sizes on social organization in multiple areas is logistically challenging and few comparative studies exist. In order to address how ecological factors influence sociality, we investigated the social organization of sperm whales in the Gulf of California (GoC) using a long-term study (1998–2004) and compare our results to other published studies. Standard photo-identification and behavioural observation techniques were used. Group size was calculated from photographic mark–recaptures using a Petersen estimator. Social organization was investigated using SocProg 2.3. Mean typical group sizes in the GoC were similar to those in the Galápagos Islands, Chile and Seychelles (24.7, 24.8, 30.4 and 18 individuals respectively), but substantially larger than in the Sargasso Sea, Caribbean and northern Gulf of Mexico (12.0, 6.4 and 6.9 individuals respectively). Sperm whale social organization in the GoC best fitted a constant companion/casual acquaintance model, where permanent units sizes were 12.5 individuals and two units usually associated together to form a group. This structure is similar to the situation in the Galápagos Islands and Chile areas. However, groups were more stable in the GoC than in the South Pacific, as groups stayed together for periods of about 80 days versus about ten days in the Galápagos Islands and Chile. It is likely that differences in the social organization between the study areas in the Pacific and Atlantic Oceans were due to differences in predation pressure and/or food resources. We suggest that, site-specific ecological factors are likely to influence fundamental aspects of sperm whale social organization.

To determine the group structure of Sotalia guianensis on the coast of Paraná State, two bays, Baía de Paranaguá and Baía de Guaratuba, were surveyed between March 1999 and February 2000 and between July 2002 and June 2003 respectively. The heterogeneity of the studied areas was considered a relevant factor, therefore these areas were sectored and each sector was investigated independently. The surveys were carried out through boat line transects and all the animals were registered, even those localized between two transects. The records were taken for the quantity of groups as well as for the amount of individuals in each group and, whenever possible, the individuals were classified as calves or adults. The data were treated both separately and comparatively between the two bays and amongst the sectors of each bay. In Baía de Paranaguá, 735 individuals were registered, divided into 253 groups which varied from 2 to 37 individuals for an average of 2.9 individuals per group. Most of the groups presented a family formation (59.29%) and were observed during the morning. The individuals that were clearly identified as calves represented 24% of the total (176 individuals), adults 55% (405 individuals) and 21% (154 individuals) were impossible to determine. In Baía de Guaratuba, only 32 S. guianensis individuals were observed and distributed into 14 groups for an average of 2.13 individuals per group. These groups varied from 2 to 6 individuals mostly in family formations (50%). The same quantity of individuals and groups was observed during different periods of the day. Of the 32 sampled individuals, 25 (78%) were adults, only one was a calf (3%) and 6 (19%) were undetermined.

Humpback whales (Megaptera novaeangliae) have a worldwide distribution in the oceans and are known for their very long migratory potential. Their migration routes consist of productive feeding areas located in high-latitudes and to low-latitude areas used as breeding and calving grounds. Genetic studies in humpback whale populations consist mainly of nuclear and mitochondrial DNA. In general, these studies provide similar results to estimates of gene flow, but some discrepancies may be caused by gender-biased migration to breeding grounds and further dispersion by males. There is little evidence of trans-equatorial and inter-oceanic migrations, but those movements have been confirmed by both analysis of photo-ID of naturally marked individuals and also genetic analysis. The combination of migratory and genetic analyses suggest an overlapping of breeding grounds in low-latitude areas, where the gene flow among those oceanic populations is more likely to happen, despite the opposite seasons in the northern and southern hemispheres. These results have important implications in the conservation perspective, especially for the determination of protected areas and for development of international agreements.

The southern right whale (Eubalaena australis) was one of the most intensively hunted whales between the 17th and 20th centuries in the southern hemisphere. Recent estimates indicate that today there are around 7000 whales, representing 5 to 10% of its original population. On the other hand, recent studies estimated that the population that migrates to the Brazilian coast grew by 14% from 1987 to 2003. However, there is no information about sex-ratio for adults or for calves in this region, which is an important parameter for understanding the biology of the species. We present here the first estimate of calves' sex-ratio of southern right whales found along the southern Brazilian coast, one of the most important wintering grounds for the species. Sex was molecularly indentified for 21 biopsies collected from calves between 1998 and 2002, along the coast of Rio Grande do Sul and Santa Catarina States, in southern Brazil. The sex-ratio was two females for one male, however, it was not statistically different (χ2 test, α = 0.05; df = 1) from the expected ratio of 1:1. This result is in accordance with the sex-ratio estimated for the species of all ages using external morphology (and behaviour information), as well as for most species of baleen whales.

Presently, there is no information about the functionality of the immune system in the franciscana dolphin (Pontoporia blainvillei), a small dolphin from southern Brazil. As in the case of the franciscana, the population of southern right whale (Eubalaena australis) which inhabits Brazilian waters has not yet been surveyed in what concerns MHC expression. For the first time it was possible to observe the DQB gene expression in skin of these two species of cetacean using RT-PCR. Skin pieces of the animals were collected to RNA extraction. The fragment corresponding to DQB exon 2 was amplified, cloned and sequenced. A total of five alleles were found, one to franciscana and four to southern right whale. The observed dN/dS ratio of 2.77 (P = 0.03) suggests that this gene is under balancing selection pressure (positive Darwinian selection). The sequences indicate that, in both species analysed, the DQB gene is functional.

Acoustic surveys can have several advantages over visual methods in surveys of cetaceans, although verification is required that novel techniques are effective. The T-POD is an autonomous acoustic data logger with inbuilt filters that can be set to match the click characteristics of the target species. We tested the performance of the T-POD for detecting Hector's dolphins at Flea Bay, Banks Peninsula, New Zealand. Simultaneous visual surveys were conducted from a hillside overlooking the bay, with distances between the T-POD and dolphins measured using a theodolite. Wideband sound recordings confirmed that T-POD detections were echolocation clicks made by Hector's dolphins. Detection probability and click train detection rate decreased with increasing distance, with no detections made beyond 500 m. By fitting detection functions to the probability of detection versus distance we showed that the T-POD effectively detected all dolphin groups within a radius of 198–239 m, depending on the click train categories utilized. The T-POD shows considerable promise as a tool for passive acoustic surveys of Hector's dolphins, with possible applications in studies of distribution, habitat use and echolocation behaviour.

The cetacean fauna at the Tristan da Cunha archipelago has been assessed from ship-based, aerial and land-based observations from 1983–2000, from strandings on Tristan da Cunha and Inaccessible Island between 1983 and 1995, and from whaling catch data from 1934–1967. Five species (Eubalaena australis, Megaptera novaeangliae, Tasmacetus shepherdi, Globicephala melas and Orcinus orca) have been sighted within the territorial waters of the archipelago, eight species (Balaenoptera physalus, B. borealis, B. acutorostrata/bonaerensis, Physeter macrocephalus, Mesoplodon mirus, M. bowdoini, Delphinus sp. and Lissodelphis peronii) have been seen or taken within 200 nautical miles (360 km) of the group or have been found stranded on its shores, while another two species (Caperea marginata and Lagenorhynchus obscurus) have been recorded close enough to be considered likely to occur within 200 nautical miles. The records of Mesoplodon mirus and M. bowdoini represent significant extensions to their known distribution. Apart from its possible importance as a mid-oceanic nursery area for southern right whales, the waters of the Tristan Archipelago seem to be a concentration area for T. shepherdi, one of the least-known of the world's cetaceans.

From 1994–2007 Ceredigion County Council and a network of shore-based, volunteer observers monitored levels of boat traffic and the occurrence of bottlenose dolphins Tursiops truncatus at seven sites on the coast of Cardigan Bay, Wales. We report high rates of site use and site occupancy by this species during the summer: at Mwnt for example, dolphins were recorded in >80% of 2 hours' observation periods; and at New Quay Harbour dolphins were present in >30% of all 15-minute intervals. At Mwnt and Aberporth there was a significant annual trend for increasing sighting rates; at Ynys Lochtyn a positive trend was only marginally non-significant; at New Quay Bird's Rock the trend was ambiguous but appeared stable over the seven most recent years. Although trends in site use may not reflect population trends in the wider region, these data were consistent with recent abundance estimates that indicate that the number of bottlenose dolphins using Cardigan Bay is stable or slightly increasing. Average group size at our study sites was small (<3 animals), which contrasts with observations of larger schools of the same population elsewhere in their range. The predominant behaviour in coastal Cardigan Bay is demersal foraging, often by solitary animals in shallow near-shore habitats. There was evidence that boat traffic suppressed site use by dolphins at New Quay Harbour, the busiest monitoring site: sighting rates fell when high numbers of boats were present and sighting rates were higher in 2007 than in previous years, when boat use was reduced due to poor weather during the main tourist season. This study demonstrates that networks of volunteer observers can provide a cost-effective, non-invasive means of gathering data on marine mammals for the purposes of coastal zone management.