Polychaetes from tropical ecosystems of the eastern Pacific have been poorly studied; thus, the aim of this study was to analyse their taxonomic composition in the southern Mexican Pacific shelf and to examine their biogeographic affinities. A total of 3741 specimens from 82 species, 52 genera, and 27 families were identified from 38 stations at 42–109 m depth. The Sedentaria group was more diverse (40 species, 48.8%) and abundant (1753 ind., 46.9%) compared to the Errantia (36 species, 43.9%; 346 ind., 9.2%) and the Basal Annelida groups (6 species, 7.3%; 1642 ind., 43.9%). The families Onuphidae (14 spp.), Spionidae (8 spp.), and Paraonidae (8 spp.) were the most diverse. The Amphinomidae and Spionidae accounted for 72.6% of the fauna; the remarkably high abundance of both families together is unusual in the tropical eastern Pacific. The polychaete species had high biogeographic affinities with the Mexican tropical Pacific ecoregion (45.1%), which has tropical conditions, and the Cortezian (29.3%), which has warm-temperate characteristics. Twelve amphiamerican species and ten with worldwide distribution were found. The tropical eastern Pacific is one of the world regions with the lowest number of polychaete records, thus underlining the importance of the taxonomic and biogeographic information provided here. The sampling effort should increase, since the non-parametric estimators indicated that 116–138 species were expected, instead of the 82 species actually found.