The mRNA surveillance system is known to rapidly
degrade aberrant mRNAs that contain premature termination
codons in a process referred to as nonsense-mediated decay.
A second class of aberrant mRNAs are those wherein the
3′ UTR is abnormally extended due to a mutation in
the polyadenylation site. We provide several observations
that these abnormally 3′-extended mRNAs are degraded
by the same machinery that degrades mRNAs with premature
nonsense codons. First, the decay of the 3′-extended
mRNAs is dependent on the same decapping enzyme and 5′-to-3′
exonuclease. Second, the decay is also dependent on the
proteins encoded by the UPF1, UPF2, and UPF3 genes, which
are known to be specifically required for the rapid decay
of mRNAs containing nonsense codons. Third, the ability
of an extended 3′ UTR to trigger decay is prevented
by stabilizing sequences within the PGK1 coding region
that are known to protect mRNAs from the rapid decay induced
by premature nonsense codons. These results indicate that
the mRNA surveillance system plays a role in degrading
abnormally extended 3′ UTRs. Based on these results,
we propose a model in which the mRNA surveillance machinery
degrades aberrant mRNAs due to the absence of the proper
spatial arrangement of the translation-termination codon
with respect to the 3′ UTR element as defined by
the utilization of a polyadenylation site.