A 12-residue peptide designed to form an α-helix
and self-associate into an antiparallel 4-α-helical
bundle yields a 0.9 Å crystal structure revealing
unanticipated features. The structure was determined by
direct phasing with the “Shake-and-Bake” program,
and contains four crystallographically distinct 12-mer
peptide molecules plus solvent for a total of 479 atoms.
The crystal is formed from nearly ideal α-helices hydrogen
bonded head-to-tail into columns, which in turn pack side-by-side
into sheets spanning the width of the crystal. Within each
sheet, the α-helices run antiparallel and are closely
spaced (9–10 Å center-to-center). The sheets
are more loosely packed against each other (13–14
Å between helix centers). Each sheet is amphiphilic:
apolar leucine side chains project from one face, charged
lysine and glutamate side chains from the other face. The
sheets are stacked with two polar faces opposing and two
apolar faces opposing. The result is a periodic biomaterial
composed of packed protein bilayers, with alternating polar
and apolar interfaces. All of the 30 water molecules in
the unit cell lie in the polar interface or between the
stacked termini of helices. A section through the sheet
reveals that the helices packed at the apolar interface
resemble the four-α-helical bundle of the design, but
the helices overhang parts of the adjacent bundles, and
the helix crossing angles are less steep than intended
(7–11° rather than 18°).