Additions and corrections are provided for the South African species of Graphidaceae tribe Graphideae with hyaline ascospores. Allographa oldayana I. Medeiros sp. nov. is described as new to science based on morphological, chemical and molecular data. The new species is characterized by lirellae with striate labia and a complete thalline margin, a completely carbonized excipulum, large, muriform ascospores, and the presence of hirtifructic acid. Allographa consanguinea (Müll. Arg.) Lücking, A. leptospora (Vain.) Lücking & Kalb, Diorygma aff. minisporum Kalb et al., Graphis crebra Vain., Gr. dupaxana Vain., Gr. furcata Fée, Gr. handelii Zahlbr., Gr. longula Kremp., Gr. pinicola Zahlbr., Gr. proserpens Vain, Gr. subhiascens (Müll. Arg.) Lücking and Platythecium sp. are reported as new records for South Africa. Allographa striatula (Ach.) Lücking & Kalb, Graphis analoga Nyl. and Gr. scripta (L.) Ach. are shown to be misapplied names that should be removed from the South African checklist. The new combination Mangoldia bylii (Vain.) I. Medeiros comb. nov. (bas. Graphis bylii Vain) is made; this represents an earlier name for M. atronitens (A. W. Archer) Lücking et al. Taxonomic notes are provided for Graphis bylii var. lividula Vain. and Gr. denudans Vain., species that are known only from their South African holotypes. Phylogenetic analyses that include new DNA sequence data from the nrLSU, mtSSU and RPB2 loci confirm the generic placements of several species for which molecular data were lacking: Allographa consanguinea, Glyphis atrofusca (Müll. Arg.) Lücking, Graphis crebra and Gr. subhiascens.

Termite mounds have been poorly studied in tropical rainforest in contrast to those of savannahs where they create fertility hotspots and influence the spatial pattern of vegetation. An inventory of termite mounds and of 15 tree species with a diameter at breast height ≥ 10 cm was carried out in two 800-ha blocks, in two rainforest sites located in northern Congo. We used inhomogeneous and intertype K functions to study the spatial pattern of termite mounds and of tree species around mounds, respectively. We found that mounds in Loundoungou were over-dispersed within a radius of less than 70 m, while those in Mokabi were randomly spaced. Tree species within a 20-m radius around a mound were aggregated towards the mound, e.g. Entandrophragma cylindricum, randomly distributed, or even repulsed by the mound. The specific responses also differed in the two sites. These results suggest that (i) the mounds in Loundoungou were created by savannah termite species 3,000-2,000 years BP during the Late Holocene Rainforest Crisis and (ii) the mounds in Mokabi are characteristic of forest mounds. The impact of termite mounds on the spatial pattern of tree species is thus site-dependent, and these differences might be due to species seed dispersal strategies and to soil calcium concentrations.

The Bolivian Chiquitano dry forest is the largest block of intact seasonally dry tropical forest in South America and is a priority ecoregion for conservation due to its high threat status. However, the long-term impacts of drier climatic conditions on tropical dry forests are not well understood, despite climate models predicting increased droughts over Bolivia in the coming century. In this paper, we assess the impacts of drier climatic conditions during the mid-Holocene on the Bolivian Chiquitano tropical dry forest using fossilised pollen, phytoliths, macro-charcoal, and geochemical proxies from a sediment core from a large lake (Laguna Mandioré) on the Bolivia–Brazil border. Our results show that drier climatic conditions during the mid-Holocene caused a local-scale, ecotonal expansion of upland savannah at the expense of dry forest. Interaction between drier climatic conditions and fire regime likely exerted a stronger control over the position of the dry forest–savannah ecotone than edaphic factors. However, the majority of the dry forest within the lake catchment maintained a closed canopy throughout the drier conditions of the mid-Holocene, despite floristic turnover towards more drought-tolerant taxa. These findings imply overall resilience of the Chiquitano dry forest biome to future drought, albeit with floristic changes and upland savannah encroachment at ecotones.

The savannah enclaves (i.e. patches) in the southern Brazilian Amazonia are among the most threatened and poorly surveyed sites in Amazonia. As part of an extensive mammal survey, we set camera traps in three of these savannah enclaves. We obtained 23 independent records of pampas deer Ozotoceros bezoarticus, a medium sized Neotropical cervid that is strongly associated with open habitats and categorized as Vulnerable on the Brazilian Red List of threatened species. These savannah enclaves with confirmed populations of pampas deer lie outside the species’ previously presumed historical range and are at least 350 km from any known extant population. Together, these savannah enclaves add c. 4,000 km2 to the pampas deer's currently known range. The small pampas deer populations in these enclaves are probably isolated by a matrix of Amazon forest, raising questions about spatial genetic structure and meta-population dynamics, and making them vulnerable to local extinction. We highlight the need for further studies, particularly genetic, to assess the conservation status of these populations, the results of which could potentially inform management decisions in other areas of the heavily fragmented range of this species.

The conservation of threatened species requires information on how management activities influence habitat quality. The Critically Endangered black rhinoceros Diceros bicornis is restricted to savannahs representing c. 5% of its historical range. Fire is used extensively in savannahs but little is known about how rhinos respond to burning. Our aim was to understand rhino responses to fire by studying habitat selection and foraging at multiple scales. We used resource selection functions and locations of 31 rhinos during 2014–2016 to study rhino habitat use in Serengeti National Park, Tanzania. Rhino selectivity was quantified by comparing forage consumption to plant species availability in randomly sampled vegetation plots; rhino diets were subsequently verified through DNA metabarcoding analysis of faecal samples. Rhino habitat use was a unimodal function of fire history, with highly occupied sites having fire frequencies of < 0.6 fires/year and maximum occupancy occurring at a fire frequency of 0.1 fires/year. Foraging stations had characteristic plant communities, with 17 species associated with rhino foraging. Rhinos were associated with, and disproportionately consumed, woody plants, forbs and legumes, all of which decreased in abundance with increasing fire frequency. In contrast to common management practices, multiple lines of evidence suggest that the current fire regime in the Serengeti negatively influences rhino habitat use and foraging and that frequent fire limits access of rhinos to preferred forage. We outline a conceptual model to guide managers and conservationists in the use of fire under variable habitat conditions.

A generic key to 81 genera representing 255 naturally occurring species known from Belize is presented using easily distinguished characters and including illustrations of many of the genera. An up-to-date list of the grasses of Belize is also given.

This study aimed to assess the contribution of hosts characteristics (rodents and marsupials) in the organization of ectoparasite communities present in woodland patches in western central Brazil. We verified the effect of host species, sex, body mass and vertical strata in addition to the role of seasonality on the ectoparasite composition, richness and abundance. The total sampling effort was 22 032 trap-nights equally distributed in 54 woodland patches. Variance partition and principal coordinate analysis were used to verify the existence of significant relationships between response variables and predictors. As expected, host species was the most important variable in ectoparasite community assembly. The composition, richness and abundance of mites and lice were highly influenced by host species, although higher for mites than for lice. Host body mass had a determining role on the richness and abundance of tick species. Vertical stratification and seasonality had weak influence, while the sex of the host had no influence on the organization of these communities. The results are closely related to the evolutionary characteristics of the species involved, as well as with local environmental characteristics of the study area.

To address the molecular diversity and occurrence of pathogenic species of the genus Entamoeba spp. in wild non-human primates (NHP) we conducted molecular-phylogenetic analyses on Entamoeba from wild chimpanzees living in the Issa Valley, Tanzania. We compared the sensitivity of molecular [using a genus-specific polymerase chain reaction (PCR)] and coproscopic detection (merthiolate-iodine-formaldehyde concentration) of Entamoeba spp. We identified Entamoeba spp. in 72 chimpanzee fecal samples (79%) subjected to species-specific PCRs for six Entamoeba species/groups (Entamoeba histolytica, Entamoeba nuttalli, Entamoeba dispar, Entamoeba moshkovskii, Entamoeba coli and Entamoeba polecki ST2). We recorded three Entamoeba species: E. coli (47%), E. dispar (16%), Entamoeba hartmanni (51%). Coproscopically, we could only distinguish the cysts of complex E. histolytica/dispar/moshkovskii/nuttalli and E. coli. Molecular prevalence of entamoebas was higher than the prevalence based on the coproscopic examination. Our molecular phylogenies showed that sequences of E. dispar and E. coli from Issa chimpanzees are closely related to sequences from humans and other NHP from GenBank. The results showed that wild chimpanzees harbour Entamoeba species similar to those occurring in humans; however, no pathogenic species were detected. Molecular-phylogenetic methods are critical to improve diagnostics of entamoebas in wild NHP and for determining an accurate prevalence of Entamoeba species.

Appropriate legislation based on in-depth ecological evidence is essential for ecosystem conservation. Wetland areas in the Brazilian Cerrado hotspot are facing difficulties in terms of status under environmental law: only those wetlands with the palm Mauritia flexuosa (veredas) are recognized as protected. Comprehensive fieldwork in central-western Brazil (72 50-m transects) coupled with both exploratory and confirmatory analyses showed that communities with (MP) and without (MA) M. flexuosa are similar in terms of the floristics and ecology. The results demonstrate that the analysed wetlands are part of a continuum, in which a gradual replacement of species and community structure occurs without a pattern related to physiognomy. Considering such floristic and structure patterns when legally defining the ecosystem would promote a more comprehensive and realistic view of the ecosystem's characteristics and functions, and result in laws with a stronger scientific support. Conservationists should further examine the lack of consistent separation of plant community attributes between the MP and MA areas, and reconsider the scientific definition of veredas.

Carbon-based forest conservation requires the establishment of ‘reference emission levels’ against which to measure a country or region's progress in reducing their carbon emissions. In East Africa, landscape-scale estimates of carbon fluxes are uncertain and factors such as deforestation poorly resolved due to a lack of data. In this study, trends in vegetation cover and carbon for East Africa were quantified using moderate-resolution imaging spectroradiometer (MODIS) land cover grids from 2002 to 2008 (500-m spatial resolution), in combination with a regional carbon look-up table. The inclusion of data on rainfall and the distribution of protected areas helped to gauge impacts on vegetation burning (assessed using 1-km spatial resolution MODIS active fire data) and biome trends. Between 2002 and 2008, the spatial extents of forests, woodlands and scrublands decreased considerably and East Africa experienced a net carbon loss of 494 megatonnes (Mt). Most countries in the area were sources of carbon emissions, except for Tanzania and Malawi, where the areal increase of savannah and woodlands counterbalanced carbon emissions from deforestation. Both Malawi and Tanzania contain large areas of planted forest. Vegetation burning was correlated with rainfall (forest only) and differed depending on land management. Freely available global earth observation products have provided ways to achieve rapid assessment and monitoring of carbon change hotspots at the landscape scale.

When compared to tropical forest zones in west and central Africa, off-take of wild meat from savannah and grassland biomes by local rural communities has not been well assessed. This case study of wild meat collection activities within a rural community in the Mount Frere region of the Eastern Cape (South Africa) uses last-catch records derived from 50 wild meat gatherers to calculate average off-take of taxa, species and fresh mass of wild meat per collection event. When per-event off take is overlaid onto household hunting frequency data, annual off-take would be 268.6 kg km−2 yr−1 or 3 kg person−1 yr−1 presuming constant off-take over an annual period. Monetary value of off-take would be South African R 307 (US$ 39) per household annually. For some species, off-take weight per km2 shows similar values to data from tropical forest zones, but high human population densities tend to dilute off-takes to less nutritionally significant amounts at the per person scale. However, unlike many tropical zones, none of the species harvested can be considered high-priority conservation species. Even densely populated and heavily harvested communal lands appear to offer high wild meat off-takes from low conservation priority species.

Since 1970 there has been a dramatic decline of large raptors and terrestrial birds in West African savannahs. Comparative dry season transect counts over 4,697 km of driven transects were performed in 2004–2005 in south-eastern Burkina Faso to assess the abundance of 41 raptor species and large terrestrial species in four National Parks and surrounding hunting zones and cultivated areas. Population sizes were estimated for larger taxa in protected areas using distance sampling and nest searching. Most large vultures and eagles were generally found only in protected areas, with fewer individuals in the surrounding buffer zones and nearly none elsewhere. Conversely, the abundance of most of the smaller species was not different between protected and cultivated areas, and three species were more abundant in cultivated areas. Helmeted guineafowl Numida meleagris, Stanley’s bustard Neotis denhami and Abyssinian ground hornbill Bucorvus abyssinicus were not found outside protected areas. Within the 1.4 million ha of protected areas in and around south-east Burkina Faso, six species of eagles and vultures have estimated populations of c. 100–200 pairs, five species c. 50–100 pairs, five species have populations of <50 pairs, and the secretary bird Sagittarius serpentarius was not recorded. No specific reason for the collapse of large raptors in non-protected areas (which account for 99% of the area of the countries studied) has been identified, but the consequences of fast human population growth and habitat changes, overhunting, disturbances and poisoning may have played a critical role. Updating information on the conservation status of these species would be an important first step towards their long-term conservation.