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4 - Graphs

from Part I - Preliminaries

Published online by Cambridge University Press:  28 September 2023

Veli Mäkinen ,
Djamal Belazzougui ,
Fabio Cunial  and
Alexandru I. Tomescu
Veli Mäkinen
Affiliation:
University of Helsinki
Djamal Belazzougui
Affiliation:
Centre de Recherche sur l’Information Scientifique et Technique (CERIST), Algiers
Fabio Cunial
Affiliation:
Broad Institute, Massachusetts
Alexandru I. Tomescu
Affiliation:
University of Helsinki
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Summary

Graphs are a fundamental model for representing various relations among data. The aim of this chapter is to present some basic problems and techniques relating to graphs, mainly for finding particular paths in directed and undirected graphs. In the following chapters, we deal with various problems in biological sequence analysis that can be reduced to one of these basic ones.

Type
Chapter
Information
Genome-Scale Algorithm Design
Bioinformatics in the Era of High-Throughput Sequencing
 , pp. 42 - 52
Publisher: Cambridge University Press
Print publication year: 2023

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  • Graphs
  • Veli Mäkinen, University of Helsinki, Djamal Belazzougui, Centre de Recherche sur l’Information Scientifique et Technique (CERIST), Algiers, Fabio Cunial, Broad Institute, Massachusetts, Alexandru I. Tomescu, University of Helsinki
  • Book: Genome-Scale Algorithm Design
  • Online publication: 28 September 2023
  • Chapter DOI: https://doi.org/10.1017/9781009341257.006
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  • Graphs
  • Veli Mäkinen, University of Helsinki, Djamal Belazzougui, Centre de Recherche sur l’Information Scientifique et Technique (CERIST), Algiers, Fabio Cunial, Broad Institute, Massachusetts, Alexandru I. Tomescu, University of Helsinki
  • Book: Genome-Scale Algorithm Design
  • Online publication: 28 September 2023
  • Chapter DOI: https://doi.org/10.1017/9781009341257.006
Available formats
×

Save book to Google Drive

To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Google Drive.

  • Graphs
  • Veli Mäkinen, University of Helsinki, Djamal Belazzougui, Centre de Recherche sur l’Information Scientifique et Technique (CERIST), Algiers, Fabio Cunial, Broad Institute, Massachusetts, Alexandru I. Tomescu, University of Helsinki
  • Book: Genome-Scale Algorithm Design
  • Online publication: 28 September 2023
  • Chapter DOI: https://doi.org/10.1017/9781009341257.006
Available formats
×