Book contents
- Frontmatter
- Dedication
- Contents
- Introduction
- Part I
- 1 A Flyover Introduction to Integer Linear Programming
- 2 Biological Networks, Graphs, and High-Density Subgraphs
- 3 Maximum Character Compatibility in Phylogenetics
- 4 Near Cliques, Dense Subgraphs, and Motifs in Biological Networks
- 5 Convergent and Maximum Parsimony Problems in Phylogenetics
- 6 The RNA-Folding Problem
- 7 Protein Problems Solved By Integer Programming
- 8 Tanglegrams and Coevolution
- 9 Traveling Salesman Problems in Genomics
- 10 Integer Programming in Molecular Sequence Analysis
- 11 Metabolic Networks and Metabolic Engineering
- 12 ILP Idioms
- Part II
- Bibliography
- Index
2 - Biological Networks, Graphs, and High-Density Subgraphs
from Part I
Published online by Cambridge University Press: 31 May 2019
Book contents
- Frontmatter
- Dedication
- Contents
- Introduction
- Part I
- 1 A Flyover Introduction to Integer Linear Programming
- 2 Biological Networks, Graphs, and High-Density Subgraphs
- 3 Maximum Character Compatibility in Phylogenetics
- 4 Near Cliques, Dense Subgraphs, and Motifs in Biological Networks
- 5 Convergent and Maximum Parsimony Problems in Phylogenetics
- 6 The RNA-Folding Problem
- 7 Protein Problems Solved By Integer Programming
- 8 Tanglegrams and Coevolution
- 9 Traveling Salesman Problems in Genomics
- 10 Integer Programming in Molecular Sequence Analysis
- 11 Metabolic Networks and Metabolic Engineering
- 12 ILP Idioms
- Part II
- Bibliography
- Index
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- Integer Linear Programming in Computational and Systems BiologyAn Entry-Level Text and Course, pp. 15 - 48Publisher: Cambridge University PressPrint publication year: 2019