Using experimental data and a model to predict size selection based on morphological data, we investigated size selection of redfish (Sebastes spp.) in the grid-based selection systems used in Northeast Atlantic trawls. We found that not all redfish make physical contact with the spacing between the bars in the sorting grids while they pass in the direction of the codend, and therefore the escapement of some undersized redfish depends on size selection in the codend. We estimate that most of the escapement in the combined selection system (consisting of a 55-mm grid and a diamond mesh codend) happens through the grid. We demonstrated that for one of the two grid systems investigated the increase in size selection obtained experimentally by increasing grid-bar spacing is well in line with what could be expected based on the morphology of redfish. However, the size selection observed experimentally was significantly lower than the size-selective potential of the grids estimated based on the morphology of redfish. By computer simulations, we show that a possible explanation for this difference could be that not all redfish that attempt to escape through the grid make their attempt with an optimal angle of attack.

Replacing aquaculture feeds based on fisheries-derived resources with plant-based dietscould be a relevant strategy to improve the sustainability of aquaculture. Recent studieson sea bass have shown that the total and early replacement of marine products by plantproducts would have a moderate effect on fish growth and body lipid content. Whether aplant-based diet impacts behavioural and physiological traits possibly linked to fishwelfare, is not known, however. Here, we studied the effect of a totally plant-based dietintroduced at an early stage of sea bass development on self-feeding behaviour, learningability in a T-maze and stress biomarkers. We first compared learning processes inself-feeding conditions, between naive fish fed a plant-based diet (PBF) and fish fed aclassic marine diet (MF). Then, we tested fish individually in a T-maze to compare the twofeed groups for swimming activity, exploration and the ability to learn to discriminatebetween two two-dimensional objects associated with a reward. Blood physiologicalvariables, including stress indicators (cortisol and glucose concentrations), were alsodetermined. We did not find any indications of differences in self-feeding behaviourbetween PBF and MF in the first 30 days. A second experiment showed similar swimmingactivities in both fish categories. The “no-choice” percentage was high in both fishcategories (~60%), but all the fish moved preferentially toward the reward. Theirfirst turns indicated an ability to discriminate between two two-dimensional objects tocomplete a simple task. However, the high percentage of “no-choice” responses in both fishcategories could have rendered the results non significant. The T-maze test procedureinduced the production of high concentrations of cortisol, indicating acute stress in fishof both groups during testing. Plasma cortisol concentration was higher in MF than PBF,suggesting that the plant-based diet may affect the short-term release of cortisol. Thisstudy provides the first insight into the impact of a plant-based diet on sea bassbehavioural traits, and confirms the effect of this diet on cortisol release in responseto stress. Overall, in this first experiment, we did not find any major impact of aplant-based diet on sea bass behavioural traits, which is an interesting point for thedevelopment potential of such a sustainable aquaculture strategy.

Individual Pinctada margaritifera molluscs were collected from the Takapoto atoll (Tuamotu Archipelago, French Polynesia) and used to produce ten first generation full-sib families in a hatchery system, following artificial breeding protocols. After three years of culture, these progenies were transferred to Rangiroa atoll (Tuamotu Archipelago, French Polynesia) and tested for their potential as graft donors. A large-scale grafting experiment of 1500 grafts was conducted, in which a single professional grafter used ten individual donor oysters from each of the ten families, grafting 15 recipient oysters from each donor. The recipient oysters were all obtained from wild spat collection in Ahe (Tuamotu Archipelago, French Polynesia). After 18 months of culture, 874 pearls were harvested. Highly significant donor family effects were found for nucleus retention, nacre thickness, nacre weight, pearl colour darkness and visually-perceived colour (bodycolor and overtone), pearl shape categories, surface defects and lustre, the last two of which are components of the Tahitian classification grade. No significant difference was recorded between the ten G1 families for the absence or presence of rings. The progenies could be ranked from “best” (i.e., the donor whose grafts produced the greatest number of grade A pearls) to the “worst”. Some progenies had extreme characteristics: family B presented the greatest number of pearls with lustre (98%) and a high proportion of dark gray to black with green overtone pearls (70%). These results have important implications for the selective breeding of donor pearl oysters: it may be possible to reach a point where specific donor lines whose grafts produce pearls with specific quality traits could be identified and maintained as specific breeding lines.

As marine protected areas (MPAs) are increasingly being utilised as a tool for fisherymanagement, their impact on the food web needs to be fully understood. However, little isknown about the effect of MPAs on fish assemblages, especially in the presence ofdifferent life history and ecological traits. Modelling the observed changes in fishpopulation structures may provide a mechanistic understanding of fish assemblage dynamics.In addition, modelling allows a quantitative estimate of MPA spill-over. To achieve thispurpose, we adapted an existing ecosystem model, OSMOSE (Object-oriented simulator ofmarine biodiversity exploitation), to the specific case of the presence of fish withmultiple life histories. The adapted model can manage 4 main categories of life historyidentified in an estuary MPA: fish that (1) spend their entire life cycle locally, (2) arepresent only as juveniles, (3) enter the area as juveniles and stay permanently exceptduring reproduction periods, which occur outside the estuary, and (4) are presentoccasionally and for a short time for foraging purposes. To take into account thesespecific life-history traits, the OSMOSE code was modified. This modelling approach wasdeveloped in the context of the Bamboung Bolong MPA, located in a mangrove area in theSine-Saloum Delta, Senegal. This was the ideal case to develop our approach as there hasbeen scientific monitoring of the fish population structure inside the MPA before fisheryclosure, providing a reference state, and continuous monitoring since the closure.Ecologically similar species were pooled by trophic traits into 15 groups that represented97% of the total biomass. Lower trophic levels (LTL) were represented by 6 compartments.The biomass of the model species was calibrated to reproduce the reference situationbefore fishery closure. Model predictions of fish assemblage changes after fishery closurecorresponding to the Bamboung MPA creation scenario were compared to field observations;in most cases the model reproduces observed changes in biomass (at least in direction). Wesuggest the existence of a “sanctuary effect”, that was not taken into account in themodel, this could explain the observed increase in biomass of top predators not reproducedby the model. Finally, the annual MPA fish spill-over was estimated at 11 tons (~33% ofthe fish biomass) from the model output, mainly due to diffusive effects.

Through a review of the scientific literature and a more in-depth qualitative meta-analysis of 16 case studies distributed worldwide, this article aims to study impacts of MPAs on marine living resources, ecosystems and related fisheries and to highlight their criteria of efficiency as management tools for a sustainable exploitation. MPAs are efficient for conservation purposes and resource restoration, especially inside their borders. MPAs can also be part of fisheries management systems, but there is a lack of knowledge about their wider scale impacts on fish stocks, ecosystem and fisheries. Adjacent fisheries can increase their catches near closed areas, but such effects are delayed until after MPA establishment and are often limited over distance. Even though local specificities in ecosystems and fishing resources lead to high variability in MPA effects, four major criteria modulate the efficiency of MPAs for fisheries management: (1) the size of the closed area; (2) the level of protection of essential habitats for exploited resources; (3) MPA integration as part of wider integrated fisheries management plans; and (4) efficient monitoring and regulation systems, including participative decision making, to ensure that restrictive measures are respected.

The benefits of implementing no-take Marine Protected Areas (MPAs) for the conservationof highly migratory species are not easy to assess. They depend on several factors, suchas the fish mobility, fisher behaviour and the area covered by the MPA with respect to thedistribution area of the species to protect. In this study, we explore the simultaneouseffects of MPAs and fishing scenarios on skipjack tuna population dynamics, using thespatially-explicit APECOSM-E model. The model represents the size-structured populationdynamics of skipjack tuna in the Indian Ocean and their dependence on climatic variabilityand exploitation by fisheries. Numerical experiments were run from the beginning ofindustrial fisheries in the early 1980s to the year 2030, considering different scenariosfor the future development of fisheries. These scenarios combined different trends infishing effort and technological development, either assuming a continuous increasefollowing historical trends or a stabilization of these factors at present values. Thesimulations were designed to explore the effects of two MPAs of different size andlocation: the recently established Chagos MPA, and a hypothetical MPA covering a largepart of the Western Indian Ocean, where most of the skipjack catches are presently made.We modelled the redistribution of fishing effort around the MPAs assuming that the fishershad partial knowledge of the spatial distribution of the skipjack population. The effectsof the two MPAs on the population dynamics, catch and fishing mortality are shown. Ourresults revealed a very minor effect of the Chagos MPA on the skipjack tuna population,while the Western Indian Ocean MPA had an important impact on the fishing mortality andsucceeded in stabilizing the spawning population. The simulations also showed that theeffect of an MPA depends on the evolution of fisheries and it is therefore important toexplore different fishery scenarios to assess the future benefits of an MPA.

An integrated research program was initiated to evaluate if the European shagPhalacrocorax aristotelis can be used as a robust indicator of themarine environment in Mor Braz, Brittany, France. This program focuses on aspects of theecology of the shag including its abundance, demography, diet and at-sea distributionmeasured at three breeding colonies. The annual population growth rate was estimated at1.01 for the period 1987–2009. The number of breeding pairs (mean: 565) was highlyvariable from year to year. Part of this interannual variation was explained by variationsin sea surface temperature and sea surface height in winter and spring: the number ofbreeding pairs was negatively related to sea surface temperature and sea surface height.First year, second year and adult survival probabilities were 0.44, 0.76 and 0.81,respectively. Juvenile survival rate varied between colonies, despite the short distancesseparating these islets. Average productivity was one young fledged per nest, but itvaried between years and islets. Density of individuals at sea varied between 1.40ind.km-2 during the breeding season and 3.08 ind.km-2 after thebreeding season had ended. Individuals foraged up to 7 km from the nest and performed onaverage 2.7 foraging trips per day. The average number of dives deeper than 5 m variedfrom 126 to 400 per day. Mean diving depth, dive duration and time spent at bottom were 13m, 28 s, and 19 s respectively. Regurgitated pellets were collected regularly. Four fishfamilies (Gadidae, Gobiidae, Atherinidae and Labridae) represented more than 65% of thepreys throughout the year, a percentage reaching more than 95% of the prey from May toOctober. The other fish in the diet were Cottidae, Ammodytidae, and Clupeidae. The diet ofthe European shag consisted of benthic fish throughout the year, and also included pelagicfish more frequently between June and October. The synchronous variations of productivitybetween colonies suggest that some common environmental factors affect this demographicparameter at the regional scale. Thus, the European shag has a good potential for being areliable ecological indicator of the state of this marine environment. Finally, improvedknowledge on the foraging ecology of shags will be useful in the process of designingMarine Protected Areas in the Mor Braz to help ensure sustainable management of marineresources and biodiversity conservation.

Research on the biology and ecology of cold-water corals (CWCs) is still in its infancy.The growth patterns of CWCs in their natural environments are poorly known. Growth rateinvestigations on these deep-sea reef builder species are needed to predict recovery timesfollowing damage to their ecosystems. This study investigates a new approach for analysingCWC growth rate, suitable for in situ application. Lopheliapertusa and Madrepora oculata (Scleractinian) were collectedfrom the Lacaze-Duthiers canyon in the northwestern Mediterranean Sea (520 m depth),marked and then either redeployed in situ for 6 months, or maintained inaquaria for growth rate comparison at a constant temperature of 13 °C, corresponding totheir habitat conditions. Two different types of staining (calcein and manganese) andthree different exposure times (30, 60 and 240 min) were tested. The results show thatcalcein offers rapid incorporation and easy detection, making it particularly suitable forskeletal growth rate investigations compared with other chemical staining. In situlinear polyp growth rates of 7.5 ± 1.2 mm y-1 and 3.5 ± 2.1 mmy-1 were measured in new polyps of L. pertusa and M.oculata, respectively. Those values were significantly higher in young polypsthan in older ones, where they decreased to 1.3 ± 1.5 mm y-1 and 1.2 ± 1.2 mmy-1. Beyond the study of coral reef growth processes, this approach offers amethodological basis for habitat quality assessment which could be used in the managementof deep-sea marine protected areas (MPA).

Marine protected areas (MPAs) have been depicted as a useful tool for improving fisherymanagement and protecting biodiversity. For example, by acting as source populations, MPAsmay provide a spillover of adults/propagules, enhancing recruitment to surrounding,non-protected waters. However, such positive effect will depend on how a MPAs designmatches population biology and dispersal abilities of the target species. High levels ofintraspecific genetic diversity without pronounced structure have been found in manymarine organisms over large spatial scales (from hundreds to thousands kilometres) but donot hold for other ecologically and economically important species such as coral reeffishes, seagrasses and kelps. In particular, the limited potential for dispersal of manymacroalgae suggests the occurrence of self-sustaining, “closed” populations that contrastwith the “open” populations of many fishes and invertebrates. Consequently, the highresilience of fish/invertebrate populations cannot be generalized to the whole marinerealm. In the present work, we use genetic tools to explore the role of the MPAParc naturel marin d’Iroise in the management of the emblematic kelpLaminaria digitata. While kelps have received much more scientificattention than any other seaweed group, there is still critical baseline knowledge whichneeds to be addressed for their effective management. Our genetic survey of 12 L.digitata populations along the Brittany coast, four of them located within theboundaries of the Parc naturel marin d’Iroise, allowed us to assess theconservation value of these kelp populations. In particular, classical genetic metrics aswell as more recent clustering approaches were used to identify and characterizeManagement Units. Moreover, assignment tests were employed to determine contemporarymigration events and source/sink populations. Our results show that populations withinthis MPA have high conservation value. However, we also identify other populations ofconservation interest.