The use of parasites as biological tags in population studies of marine fish in the south-western Atlantic has proved to be a successful tool for discriminating stocks for all species to which it has been applied, namely: Scomber japonicus, Engraulis anchoita, Merluccius hubbsi and Cynoscion guatucupa, the latter studied on a broader geographic scale, including samples from Uruguayan and Brazilian waters. The distribution patterns of marine parasites are determined mainly by temperature–salinity profiles and by their association with specific masses of water. Analyses of distribution patterns of some parasite species in relation to gradients in environmental (oceanographic) conditions showed that latitudinal gradients in parasite distribution are common in the study area, and are probably directly related to water temperature. Indeed, temperature, which is a good predictor of latitudinal gradients of richness and diversity of species, shows a latitudinal pattern in south-western Atlantic coasts, decreasing southwards, due to the influence of subtropical and subantarctic marine currents flowing along the edge of the continental slope. This pattern also determines the distribution of zooplankton, with a characteristic specific composition in different water masses. The gradient in the distribution of parasites determines differential compositions of their communities at different latitudes, which makes possible the identification of different stocks of their fish hosts. Other features of the host–parasite systems contributing to the success of the parasitological method are: (1) parasites identified as good biological tags (i.e. anisakids) are widely distributed in the local fauna; (2) many of these species show low specificity and use paratenic hosts; and (3) the structure of parasite communities are, to a certain degree, predictable in time and space.

Parasites have been used successfully as biological tags in population studies, mainly in marine fishes, but also in marine mammals, crustaceans and molluscs. Almost all published information dealing with parasites as biological tags evaluates differences between localities. However, local variability in the component community has not been assessed. In this work, we examined whether local variation of the metazoan parasite fauna of Engraulis ringens, extracted from five independent samples from two nearby localities in northern Chile, can be a factor causing bias in stock identification. Our results show that local variability, as estimated by a single sample, may suffice to represent component community variability with no need for replicated data.

In the present paper, recent results obtained on the use of different distributions observed in larval species of Anisakis, genetically identified by means of allozyme markers, for stock characterization of demersal (Merluccius merluccius), small (Trachurus trachurus) and large pelagic (Xiphias gladius) finfish species in European waters, are reviewed and discussed. Several species of Anisakis were identified in the three fish hosts: A. simplex (s.s.), A. physeteris, A. typica, A. ziphidarum,A. pegreffii, A. brevispiculata and A. paggiae. Canonical discriminant analysis performed on all the samples of the three fish species collected in areas comprising their geographical range, according to the different species of Anisakis identified, showed distinct fish populations in European waters. In all the three fish hosts, the pattern of distribution of Anisakis larvae allowed discrimination of Mediterranean stocks from Atlantic stocks. In the case of swordfish, the possible existence of a southern Atlantic stock separated from a northern one is also suggested. Congruence and discordance with the population genetic data inferred from allozyme markers on the same samples of the three fish species are also discussed.

Studies conducted in the 1980s suggested that parasites were useful in distinguishing adjacent populations of Atlantic cod Gadus morhua in the north-western Atlantic. During the mid-1980s, cod populations began to decline, culminating in closure of the fishery in 1992. A marked decrease of cod off the coast of Labrador was coincident with climatic shifts, including a decline of bottom sea temperature, and virtual absence of capelin Mallotus villosus, its main food prey. These changes in some components of the ecosystem were independent of anthropogenic influences. An initial survey of cod parasites in 2000 from coastal Labrador revealed a dramatic decline in abundance of metazoans and also a change in dominance of species of digenetic trematodes compared to 1980–1981. Comparison of metazoan parasites in three other populations of cod inhabiting the Grand (northern and southern) and St. Pierre Banks, where there was no apparent evidence of environmental changes but only commercial over-exploitation, revealed no major alterations in abundance or dominance between 1980–1981 and 2003. The results of this current study suggest that environmental changes in the food web affected the abundance of metazoan parasites only off coastal Labrador but did not influence the use of the parasites to distinguish between cod populations inhabiting the Grand or St. Pierre Banks.

Herring Clupea harengus L. viscera were examined for endoparasitic infections as part of a multidisciplinary stock identification project (WESTHER, EU Contract no. Q5RS-2002-01 056) which applied a range of stock discrimination techniques to the same individual fishes to obtain comparable results for multivariate analysis. Spawning and non-spawning adults, and juvenile herring were caught, over 3 years, by commercial and research vessels from numerous locations to the west of the UK and Ireland, along with control samples of spawning fish from the eastern Baltic Sea, and juveniles from sites in the eastern and western North Sea, and the north of Norway. The metacercariae of two renicolid digeneans (Cercaria pythionike and Cercaria doricha), one larval nematode (Anisakis simplex s.s.) and one larval cestode (Lacistorhynchus tenuis) were selected as tag species. Results were compared with those from herring collected between 1973 and 1982, which suggested remarkable stability in the parasite fauna of herring in the study area. These species were used to compare the parasite infracommunities of spawning herring. A significant variation in infracommunity structure was observed between different spawning grounds. These results suggest that the parasite fauna of herring are spatially variable but remain temporally stable in both the short and long term. Significant differences in prevalence and abundance of infections and comparisons of parasite infracommunity enabled the separation of putative herring stocks west of the British Isles. Distinctive patterns of parasite infection in two different spawning groups off the north coast of Scotland suggest that this area is occupied by two spawning populations, one recruiting from the west of Scotland, the other from outside this area, and most likely from the eastern North Sea. The distribution patterns of L. tenuis, C. doricha and C. pythionike suggest the potential for fish that spawn in three distinct International Council for the Exploration of the Seas (ICES) management units to be present in mixed aggregations found over the Malin Shelf, with significant implications for management in this area.

This is the first study of the parasite fauna of Eleginops maclovinus in the Falkland Islands. It was undertaken to catalogue the parasite fauna of E. maclovinus in order to provide a baseline for future studies and to determine whether parasites might be used as biological tags. Between 21 January and 17 March 2002 samples were taken from three stations, Teal Creek (30 fish), Port Louis (30 fish) and Camilla Creek (10 fish), all in East Falkland, and examined for protozoan and metazoan parasites. Twenty-four parasite taxa were recorded, of which three were possible new species, two new host records and five new geographical records. Because of the small number of fish in the Camilla Creek sample it was excluded from further analyses. E. maclovinus is a protandrous hermaphrodite and all fish greater than 53 cm total length were found to be female, so these too were excluded from further analyses. The parasite data from the remaining fish were analysed by an agglomerative hierarchical cluster analysis using an average linkage and a Jaccard measure of similarity, followed by a linear discriminant function analysis (LDA). Both analyses misclassified only one fish from Port Louis as being from Teal Creek, with the LDA giving an overall correct classification of 97.5% (39/40). The results support mechanical tagging data in suggesting that smaller male E. maclovinus are resident in the creeks in which they are caught, and that at this stage of their lives they tend not to migrate over long distances.

Proper fisheries management of the Atlantic croaker Micropogonias undulatus is necessary in the United States due to the commercial and recreational importance of this fish species. Croaker stock structure in the western North Atlantic has been investigated in the past by various authors, with inconclusive results. In this study, macroparasites were used as biological tags to identify putative croaker stocks in the area between New Jersey and Florida, which encompasses the Mid Atlantic Bight and the South Atlantic Bight separated at Cape Hatteras, North Carolina. The macroparasite community of the fish was identified, showing the presence of 30 species in four phyla, of which several were new host records, and one species, a monogenean, was new to science. A canonical correspondence analysis was applied to determine the variables responsible for parasite species composition, to resolve the question of croaker stock structure in the western North Atlantic Ocean. This analysis showed that latitude was the deciding variable delineating the parasite community composition of the Atlantic croaker. Among the 30 parasites, 15 were identified as putative tags according to qualitative criteria, and then 10 out of those 15 were selected as being appropriate tags using quantitative criteria. These parasite tags support the presence of two stocks roughly separated at the known biogeographical barrier at Cape Hatteras.

Studies of parasites as fish population tags often apply a single round of sampling to identify potential stocks or predict harvest localities. However, the lack of replication generates pseudoreplication, implicitly assuming that infection levels are more similar between samples from the same locality than between samples from different localities. We evaluated this assumption in the case of the striped red mullet Mullus surmuletus in three localities of the Spanish Mediterranean separated by c. 300 km. Samples of 25 fish of similar size were collected in each locality in the summer and autumn of two consecutive years. Prevalence and abundance of three long-lived parasite taxa differed significantly among localities, indicating their potential as stock indicators. However, a cluster analysis (for prevalence) and a MANOVA (for abundance) indicated strong inter-sample variability, even within the same locality, with poor spatial segregation among samples. A linear discriminant analysis (LDA) based on the abundance of 17 parasite taxa correctly assigned over 80% of fish to their locality, and 95% bootstrap confidence intervals of percent classified fish per locality were narrow, indicating good and stable predictive power. However, when a LDA based on data from the first year was used to predict the locality of fish from the second year, predictive power dropped drastically (46% of correct allocation). Overall, we interpret that parasite communities of mullets change at a much lower spatial scale than that adopted in this study. This finding strongly suggests the need for proper replication to make reliable inferences about stock structure in fish populations based on parasitological data.

In 2003, the parasite fauna of 197 European eels Anguilla anguilla, captured at three different locations (Laufenburg, Karlsruhe and Beneeden Leeuwen) in the River Rhine, was analysed. The eels harboured a total of 18 species, among them the protozoa (Myxidium giardi, Myxobolus kotlani and Trypanosoma granulosum), acanthocephalans (Acanthocephalus anguillae, Acanthocephalus lucii, Echinorhynchus truttae, Pomphorhynchus laevis), nematodes (Paraquimperia tenerrima, Pseudocapillaria tomentosa, Camallanus lacustris, Raphidascaris acus, Spinitectus inermis and Anguillicola crassus), cestodes (Bothriocephalus claviceps and Proteocephalus macrocephalus) and monogeneans (Pseudodactylogyrus sp.). The parasite fauna at the different locations is discussed with respect to the crustacean fauna present at these locations. The investigation shows that changes in the composition of the crustacean fauna, due to the anthropogenic breakdown of a biogeographic barrier, are reflected in the composition of the intestinal eel parasite fauna.

The relationship between the exposure of organisms to chemicals and subsequent alterations in various biochemical processes (commonly referred to as biomarkers) is of growing importance in environmental and ecotoxicological research. However, parasites which also affect the physiological homeostasis of their hosts, and thus may alter biomarker reactions, are usually ignored in environmental research. To address this deficit, we have used the host–parasite system Gammarus roeseli naturally infected with cystacanths of the acanthocephalan Polymorphus minutus to investigate whether infection of gammarids with parasites alters their heat shock protein response following exposure to palladium (Pd). After 24 days of metal exposure relative levels of heat shock protein hsp70 were analysed in the tissues of parasites and intermediate hosts. Simultaneously, the metal accumulation in gammarids and parasites was determined. As none of the infected gammarids showed hsp70 levels at the end of the Pd exposure (either exposed or not), infected and unparasitized G. roeseli were exposed to heat. Again, only uninfected gammarids showed a temperature-dependent increase in hsp70 levels. Interestingly, although the intermediate hosts showed no hsp70 response, exposure to Pd and heat results in increasing hsp70 in the parasites within in the haemocoel of G. roeseli. Heat experiments with isolated cystacanths also showed increasing hsp70 levels in P. minutus with temperature. Concerning uninfected G. roeseli, exposure to Pd and heat causes a hsp70 response. Pd concentrations were found to be higher in the larval parasites than in the gammarids. This result clearly contradicts previous results, as high metal accumulation was so far only described from adult acanthocephalans. Our findings provide experimental evidence that parasites alter the biomarker responses of their host and that the infection status of test animals is extremely important for ecotoxicological studies.

The parasite fauna of young-of-the-year herring Clupea harengus L., off Gullmarsfjord and Brofjorden, west coast of Sweden, was studied between May and October for 4 years, from 1994 to 1997. Fifteen species of parasites were found: two Protozoa – Trichodina sp. and Ceratomyxa auerbachi; one species of uncertain affinity – Ichthyophonus hoferi; two Monogenea – Gyrodactylus harengi and Pseudanthocotyloides heterocotyle; five Digenea – Cryptocotyle lingua metacercariae, Cercaria pythionike metacercariae, Hemiurus luehei, Lecithaster confusus and Pseudobacciger harengulae; three Cestoda plerocercoids – Bothriocephalus sp., an acrobothriid and a tetraphyllid; one Nematoda – Hysterothylacium aduncum larva; and one Copepoda – Caligus elongatus. The number of species found in this study represents more than one-sixth of all parasites reported in herring worldwide and all parasites were acquired locally. The parasite fauna of herring from the west coast of Sweden is compared with that of herring from the Baltic Sea and other areas of the north-east Atlantic. The prevalence and intensity of parasites are presented and discussed. Morphological descriptions are based on both light and scanning electron microscopy and new features are described. Possible applications of this new information about the parasite fauna, in different areas of fisheries and fish biology studies, are discussed.