The factual evidence for aquaporins, the constituents of water channels in cell membranes and operation of water channels is reviewed in developing, maturing and germinating seeds.

The micropylar region of endosperm (ME) is a physical barrier to radicle emergence in seeds of many different species, including tomato (Solanum lycopersicum) and Arabidopsis thaliana. ME is thought to be weakened through cell wall-modifying proteins, and this is supported by transcriptome data showing enrichment of cell wall-associated genes in ME. Gibberellin and ethylene have been suggested to be involved in induction of these genes in ME. However, mechanisms underlying this critical event for germination still remain elusive. In addition to hormonal regulation of ME weakening, recent data from high-throughput analyses suggested that it might be important for the radicle tip to ‘touch’ ME (or mechanosensing), in terms of ME-specific gene induction. This emerging hypothesis can be integrated with previous hypotheses about hormonal regulation of ME-specific gene expression in seeds.

Medicago truncatula, soybean (Glycine max), Arabidopsis thaliana and rice (Oryza sativa) all belong to the core angiosperm group of plants. Seed-specific genes are important for seed formation and development in these angiosperms. The identification of genes specifically expressed in angiosperm seeds and the comparison of the expression patterns of homologous genes among different angiosperm species can provide novel insights into the functions of genes that control seed development and the evolution of angiosperms. We downloaded the sequences and expression data from the relevant databases, and the seed-specific expression of genes was identified with cut-offs of a gene expression level ratio ≥ 5 and a Z-score ≥ 6. The genes were analysed using local BLAST software with an E-value ≤ 1.0E − 505. A total of 605, 581, 778 and 722 genes showed specific expression in the seeds of Medicago, soybean, Arabidopsis and rice, respectively. Additionally, we compared the expression patterns of seed-specific genes from each species with their homologues in the other three species, and found that the degree of variation in the expression patterns of homologous genes was low among closely related species but higher among more distantly related ones. The discrepancy between the homologous gene expression patterns may be caused by the different characteristics of the cis-elements in the promoter regions of the homologous genes.

Soil tillage operations stimulate germination of buried seeds in cultivated lands, allowing them to perceive light as a germination-promoting factor. The time of burial and the effect of changing environmental factors affect the physiological state of the seeds, which may lead to an extreme light-sensitivity and very low fluence response (VLFR) through phytochrome A. This paper describes the influence of the progressive process of dormancy breakage, which is accompanied by the acquisition of extreme light-sensitivity, on processes associated with endosperm weakening and embryo growth potential in the VLFR-mediated promotion of Datura ferox seed germination. Our results show that endosperm weakening is mainly limited by β-mannosidase enzyme activity after far-red light stimulation, which is highly dependent on the dormancy level of the seeds. In addition, stimulation of the embryo growth potential by far-red irradiation did not require an extreme light-sensitivity to very low fluence of photons to reach its maximum response, and it was not completely correlated with expansin gene expression in the embryo. Our work indicates that responses of endosperm weakening and embryo growth potential to far-red irradiation, dependent on dormancy level, have different requirements for stimulation by the signalling network initiated by phytochrome A during the course of the very low fluence response in Datura ferox seeds.

Gene flow between agricultural crops and related wild plant populations can produce hybrids which differ significantly from their wild counterparts in many life history traits, including seed traits. Seeds from wild annuals often possess significant dormancy, while cultivated varieties have been selected to germinate immediately under favourable conditions. Consequently, the dormancy characteristics of crop–wild hybrids could influence their survival, seed-bank dynamics and, ultimately, the extent to which crop genes persist in wild populations. Dormancy characteristics can be influenced by both maternal effects, as well as the genetics of a seed's embryo, which are the result of contributions from both parents. Here we focus on how maternal effects and embryo genetics affect seed dormancy in crop–wild hybrid sunflowers (Helianthus annuus). Using three laboratory experiments, we quantified the germination and dormancy of 15 crop–wild hybrid sunflower cross types, while also identifying achene characteristics that may influence the differential germination observed. We found that increased frequencies of crop alleles and the maternal effects imparted by hybridization can reduce dormancy, though the effect of increased frequencies of crop alleles was more pronounced in wild- and F1-produced than in the crop-produced achenes. The more open pericarp of the crop-produced achenes and the shorter relative distance that their radicles had to travel to germinate may explain some of the observed maternal effects. Finally, we generated hypotheses about how these results could affect survival and crop gene introgression in the field.

Seeds of legumes are generally considered to have physical dormancy and to be orthodox, but most seed biologists are unaware of the various kinds and combinations of dormancy and storage behaviour in seeds of this family. The aim of our study was to document the dormancy and storage behaviour of seeds of 100 native and introduced tropical Fabaceae species in Sri Lanka and classify them into germination/storage behaviour categories. Moisture content (MC) was < 16% for fresh seeds of 94 species and >29% for those of six. Seeds of these six species had low tolerance for desiccation and for low temperatures. Thus, seeds of six species are non-orthodox and 94 species orthodox. Nine of the 100 species were non-dormant, and 2, 3 and 86 had physiological, physiological epicotyl and physical dormancy, respectively. Six germination/storage behaviour categories were identified among the 100 species. However, as in extratropical regions of the world, orthodox storage behaviour and physical dormancy are characteristic of seeds of the majority of species of Fabaceae in tropical Sri Lanka.

Spinach (Spinacia oleracea L.) seed quality is important for subsequent establishment of baby leaf and other spinach products. The indeterminate flowering pattern in spinach produces seeds of different sizes, and consequently a non-uniform seed lot. Sorting seeds based on novel sorting methods might therefore improve the establishment of spinach for producers. Spinach seeds were harvested at five different times (H1, H2, H3, H4 and H5) starting 3 weeks before estimated optimum harvest time. The harvested seeds were sorted according to chlorophyll fluorescence (CF) and seed size. Two harvest times 6 d apart were selected for further studies of seed development and germination counts. Analysis of mean germination time (MGT) of four germination counts (3, 7, 14 and 21 d) showed that smaller seed sizes ( < 3.25 mm) have lower MGT than seeds of larger sizes (>3.25 mm). A larger proportion of 2.5–3.25 mm size seeds had germinated on day 3 than both their larger and smaller counterparts at the later time of harvest (H4). Seeds with a diameter below 2.5 mm displayed the lowest MGT. Commercially, the use of chlorophyll fluorescence (CF)-sorted seeds, in combination with seed size sorting, may provide a useful tool for enhancing seed quality. Here our results demonstrate that a greater number of seeds with a low CF level had germinated on day 3 compared to the seeds with high CF levels. It is of relevance to develop a technology that could identify seeds that are sufficiently developed to germinate and successfully establish in the field regardless of seed size.

In this study we developed a sample size procedure for estimating the proportion of genetically modified plants (adventitious presence of unwanted transgenic plants, AP) under inverse negative binomial group testing sampling, which guarantees that exactly r positive pools will be present in the sample. To achieve this aim, pools are drawn one by one until the sample contains r positive pools. The use of group testing produces significant savings because groups that contain several units (plants) are analysed without having to inspect individual plants. However, when using group testing we need to consider an appropriate pool size (k) because if the k individuals that form a pool are mixed and homogenized, the AP will be diluted. This effect increases with the size of the pool; it may also decrease the AP concentration in the pool below the laboratory test detection limit (d), thereby increasing the number of false negatives. The method proposed in this study determines the required sample size considering the dilution effect and guarantees narrow confidence intervals. In addition, we derived the maximum likelihood estimator of p and an exact confidence interval (CI) under negative binomial pool testing considering the detection limit of the laboratory test, d, and the concentration of AP per unit (c). Simulated data were created and tables presented showing different potential scenarios that a researcher may encounter. We also provide an R program that can be used to create other scenarios.