The lipases from Rhizopus and Rhizomucor
are members of the family of Mucorales lipases.
Although they display high sequence homology, their stereoselectivity
toward triradylglycerols (sn-2 substituted triacylglycerols)
varies. Four different triradylglycerols were investigated,
which were classified into two groups: flexible
substrates with rotatable O′-C1′ ether or ester
bonds adjacent to C2 of glycerol and rigid substrates
with a rigid N′-C1′ amide bond or a phenyl
ring in sn-2. Although Rhizopus lipase
shows opposite stereopreference for flexible and rigid
substrates (hydrolysis in sn-1 and sn-3,
respectively), Rhizomucor lipase hydrolyzes both
groups of triradylglycerols preferably in sn-1.
To explain these experimental observations, computer-aided
molecular modeling was applied to study the molecular basis
of stereoselectivity. A generalized model for both lipases
of the Mucorales family highlights the residues
mediating stereoselectivity: (1) L258, the C-terminal neighbor
of the catalytic histidine, and (2) G266, which is located
in a loop contacting the glycerol backbone of a bound substrate.
Interactions with triradylglycerol substrates are dominated
by van der Waals contacts. Stereoselectivity can be predicted
by analyzing the value of a single substrate torsion angle
that discriminates between sn-1 and sn-3
stereopreference for all substrates and lipases investigated
here. This simple model can be easily applied in enzyme
and substrate engineering to predict Mucorales
lipase variants and synthetic substrates with desired stereoselectivity.