The evaluation of the genetic quality of a seed lot is crucial for the quality control process in its production and commercialization, as well as in the identification of superior genotypes and the verification of the correct crossing in plant breeding programmes. Current techniques, based on the identification of seed morphological characteristics, require skilled analysts, while biochemical methods are time-consuming and costly. The application of spectral imaging analysis, which combines digital imaging with spectroscopy, is gaining ground as a fast, accurate and non-destructive method. The success of this technique is closely linked to chemometric techniques, which use statistical and mathematical tools in data processing. The aim of the work was to evaluate the main procedures in terms of spectral image analysis and chemometric procedures applied in seed phenotyping and its practical application. A systematic review was conducted using the PRISMA methodology, in which a total of 1304 articles were identified and screened to the inclusion of 44 articles pertaining to the scope. It was concluded that spectral image analysis has a high ability to classify seeds of different genotypes (93.33%) in a range of situations: between cultivars; hybrids and progenitors; and hybrids and lines, as well as in the separation of coated seeds. Accurate classification can be obtained by different strategies, such as the choice of the equipment type, the spectrum range and extra features, guided by the characteristics of the species, as well as in the choice of algorithms and dimensionality reduction procedures for the optimization of models when there is a large amount of data. Despite the fact that the practical application of this technique in seed phenotyping still needs to be developed for use in laboratories with large volumes of analyses, lots, genotypes and harvests. Research has been accelerated to overcome the practical challenges of this method, as seen in works using model update algorithms, online classification systems, and real-time classification maps. Thus, there are strong indications that the application of multispectral image analysis will reach the routine of seed analysis laboratories.

Pulsatilla chinensis (Bunge) Regel has been widely used in the pharmaceutical industry. With the deepening of clinical application, the research on its plant resources has attracted much attention. However, the underlying molecular mechanisms of distinct germination during Pulsatilla seed development are still mostly unknown. Therefore, in this study, four germination stages of P. chinensis seeds, with obvious differences in seed appearance traits, were used as materials. Transcriptome sequencing technology was used to analyse the molecular mechanisms of seed germination. A total of 27,601 differentially expressed genes (DEGs) (six different groups) were determined. KEGG enrichment analysis revealed that the up-regulated DEGs were enriched in phenylpropanoid biosynthesis, photosynthesis, photosynthesis–antenna proteins, plant hormone signal transduction, flavonoid biosynthesis and other pathways. A total of 87 DEGs was enriched in phytohormone signal transduction pathways, including auxin (25), abscisic acid (13), gibberellin (6), ethylene (9) and cytokinin (7). Furthermore, a protein–protein interaction network was constructed using these DEGs. Some DEGs were validated by qRT-PCR analysis. This comprehensive analysis provided basic information on the key genes of plant hormone signal transduction pathways involved in the seed germination process of P. chinensis (Bunge) Regel.

Cumulative oxidation of cellular macromolecules during storage reduces seed longevity. This study was undertaken to unravel the physiological and biochemical changes in rice seeds that contribute to deterioration during storage. Rice seeds maintained at three different seed moisture contents (SMC; 10, 12 and 14%) were stored in airtight glass jars. Half of the jars were flushed with nitrogen gas to provide modified oxygen conditions, while the other half were sealed with natural air (21% O2). Seed quality in terms of germination and antioxidant defence mechanisms was monitored after 3 and 6 months of storage at 25°C. The results showed that seeds performed better when stored at low SMC (10 and 12%), whereas the deterioration process accelerated in seeds stored at higher SMC (14%). Coupling high SMC with the availability of oxygen in the storage environment produced a negative effect on seed quality and longevity. Results from the antioxidant analysis showed more activity in seeds stored with oxygen at high SMC (14%) compared to lower SMC stored in modified oxygen conditions. Therefore, it is recommended that storage with low moisture levels (12%) or below (10%) is the best to preserve rice seed quality. However, at higher moisture levels (14%), the availability of oxygen in storage is more harmful to seed lifespan and quality.

Dormancy-breaking requirements and level of morphophysiological dormancy (MPD) were determined for seeds of Ilex formosana and I. uraiensis from the subtropical region, and seeds of I. rotunda from both the subtropical and tropical regions of Taiwan. We hypothesized that some Ilex species would have deep simple MPD broken by warm stratification. Germination of seeds and embryo growth was monitored at 30/20, 25/15, 20/10, 15/5°C and at 25°C. Seeds were cold-stratified and then incubated at 25/15°C, and seeds treated with GA3 and GA4 were incubated at 25/15°C. Fresh seeds reached 50% germination after 11–45 weeks of warm stratification. Pre-treatment with GA increased germination percentages of I. formosana and I. rotunda (tropical) but not I. uraiensis and I. rotunda (subtropical), while cold stratification did not promote germination of either species but increased the germination rate of I. rotunda (tropical). Embryo length in seeds of all species increased ≥710% prior to root emergence, and growth occurred during warm stratification. The positive response to GA and relatively short time for beginning of germination and to reach 50% germination indicate non-deep simple MPD in seeds of I. formosana and I. rotunda (tropical). The negative response to GA and long time for beginning of germination and to reach 50% germination indicate deep simple MPD in seeds of I. uraiensis and I. rotunda (subtropical). Thus, in both the subtropical and tropical regions of Taiwan, the seeds of Ilex species have non-deep simple and deep simple MPD that are broken by warm stratification. Furthermore, GA treatment increases the germination rate and percentage of Ilex seeds with non-deep simple MPD, and cold stratification promotes the seed germination rate of Ilex species with non-deep simple MPD in tropical region.