Caloplaca herbidella (Hue) H. Magn. and C. furfuracea H. Magn. are two isidiate, epiphytic species in the large genus Caloplaca. Caloplaca herbidella in a strict sense is normally grey and fertile with thick, somewhat coralloid isidia, but orange, sterile forms with thin isidia also occur. Caloplaca furfuracea is superficially similar morphologically to C. herbidella s. str. but has thinner, more granular isidia and generally a darker grey colour. Doubts have been raised as to whether C. furfuracea should be acknowledged as a proper species or incorporated in C. herbidella. Using morphometric methods and molecular analysis of the nrITS DNA gene we show that C. herbidella and C. furfuracea are two clearly separated species. Furthermore, the mainly sterile, orange form of C. herbidella can be regarded as a separate species that is here described as C. coralliza Arup & Åkelius. All three species are described in detail, including photographs and notes on their ecology. Finally, new distribution maps for Europe show that C. herbidella and C. coralliza are widespread in Europe, but the latter is probably less common than the former. Caloplaca furfuracea is clearly very rare in Europe with only few collections from Switzerland and Sweden, but seems to be more common in North America.

Bacidia rosellizans S. Ekman is described as new to science. Morphologically, the new species is similar to the type species of the genus, B. rosella (Pers.) De Not., particularly in the pale pink and pigment-deficient apothecia and in having the proper exciple and upper part of the hymenium inspersed with minute crystals that consist at least partly of atranorin. Bacidia rosellizans, however, differs in having a thin whitish thallus, smaller apothecia and a thinner apothecial margin, a dense layer of crystals along the excipular rim, shorter and narrower ascospores with fewer septa, and septate conidia. Whereas B. rosella is a species occurring in the nemoral zone of Europe and possibly northernmost Africa and parts of Asia (but not North America), B. rosellizans is found mainly on Populus and Salix in taiga. This species is currently known from Sweden, Russia, Canada and the USA. It was erroneously treated as Bacidia rosella in a monograph of North American corticolous species of Bacidia and Bacidina by Ekman (in Opera Botanica 127, 1996).

Fourteen genera belong to a monophyletic core of cetrarioid lichens, Ahtiana, Allocetraria, Arctocetraria, Cetraria, Cetrariella, Cetreliopsis, Flavocetraria, Kaernefeltia, Masonhalea, Nephromopsis, Tuckermanella, Tuckermannopsis, Usnocetraria and Vulpicida. A total of 71 samples representing 65 species (of 90 worldwide) and all type species of the genera are included in phylogentic analyses based on a complete ITS matrix and incomplete sets of group I intron, β-tubulin, GAPDH and mtSSU sequences. Eleven of the species included in the study are analysed phylogenetically for the first time, and of the 178 sequences, 67 are newly constructed. Two phylogenetic trees, one based solely on the complete ITS-matrix and a second based on total information, are similar, but not entirely identical. About half of the species are gathered in a strongly supported clade composed of the genera Allocetraria, Cetraria s. str., Cetrariella and Vulpicida. Arctocetraria, Cetreliopsis, Kaernefeltia and Tuckermanella are monophyletic genera, whereas Cetraria, Flavocetraria and Tuckermannopsis are polyphyletic. The taxonomy in current use is compared with the phylogenetic results, and future, probable or potential adjustments to the phylogeny are discussed. The single non-DNA character with a strong correlation to phylogeny based on DNA-sequences is conidial shape. The secondary chemistry of the poorly known species Cetraria annae is analyzed for the first time; the cortex contains usnic acid and atranorin, whereas isonephrosterinic, nephrosterinic, lichesterinic, protolichesterinic and squamatic acids occur in the medulla. Notes on the anatomy of Cetraria annae and Flavocetraria minuscula are also provided.

A monograph of the genus Placomaronea is presented; all species described earlier are revised, a total of six species is recognized, and an identification key is presented. In addition to the three previously known species, P. candelarioides, P. lambii and P. mendozae, three new species are described: Placomaronea kaernefeltii is a large rosette-like species known from one locality in northernmost Chile; Placomaronea fuegiana is a bullate, areolate species described from Tierra del Fuego, Argentina; Placomaronea minima is a small, areolate to minutely lobate species described from Chile and Argentina, and is the first species of Placomaronea to be reported from the African continent. In a phylogenetic analysis of nuclear ITS rDNA, Placomaronea is shown to form a monophyletic group within the Candelariales.

The fine-scale genetic variation and population structure of lichen-forming fungi is little known and sampling strategies are rarely recommended or discussed. I tested if the sample sizes of molecular data sets used in recent population studies of Xanthoria parietina revealed all haplotypes potentially present and, accordingly, quantified how many haplotypes were potentially missing in the samples. Data sets were concatenated from two geographical regions in Scandinavia and investigated if the sampling reached saturation at two levels: 1) individual-based using rarefaction curves and 2) population-based using species accumulation curves. At both levels, the matrices of two molecular markers (IGS and ITS) were analysed separately. The molecular markers show similar and parallel patterns in all analyses. Rarefaction analyses did not reveal different patterns for populations in different habitats, i.e., bark and rock. Species accumulation curves estimated with the Chao 1 richness estimator indicated that 23% of the IGS and 8% of the ITS haplotypes were not detected. Corresponding figures from an abundance-based coverage estimator (ACE) were 37% and 18%. Pilot studies are recommended to determine appropriate sample sizes for genetic-based population studies of lichen-forming fungi.

Lichen cover and diversity were analysed on the dwarf shrub Helianthemum oelandicum (L.) Dum.Cours. at one site in the calcareous grassland of the area known as the ‘Great Alvar’ on the Island of Öland, Sweden. The age of 22 phorophytes was determined by ring counting and varied from 8 to 41 years and was accurately predicted by the root diameter. A total of 18 lichen species was found, with a range between 0 and 13 species per phorophyte. The number of lichen species on living H. oelandicum were correlated with the phorophyte age. The number of lichen species and their coverage were greater on dead compared with living phorophytes. The species number was also higher on thin branches compared with thick branches and roots and some of the species showed preferences for dead phorophytes, and for thin branches. This study of lichen colonization and growth on dwarf shrubs in relation to phorophyte age is a new application of herbchronology.

Genetic variability and its relationship to substratum preferences within and among populations of the sorediate foliose lichen Hypogymnia physodes was investigated using sequence variation in the complete nrDNA internal transcribed spacer (ITS) region. A few samples of the putatively closely related, sorediate, H. tubulosa were also included. Samples were collected from each tree species in study sites in Estonia, Finland, and Sweden. In total, DNA sequences from 104 individuals of H. physodes and 16 of H. tubulosa were obtained. A group 1 intron situated at the end of the small subunit (SSU) of the nrDNA was detected in both species. Within-species variability was observed in both species: fifteen haplotypes were found for H. physodes and seven for H. tubulosa for the combined alignment of the intron and the ITS. Possible recombination within the total gene fragment was detected and hence the different regions (intron, ITS1, 5.8S, ITS2) were analysed separately. They show a different degree of variability both between each other and between the species. The number of haplotypes of H. physodes in the four regions are 5, 5, 1, and 5 and for H. tubulosa 5, 2, 1 and 2, respectively. A statistical parsimony estimation resulted in two unconnected networks; one containing all the samples of H. physodes and one containing all H. tubulosa samples. It was not possible to show different potentials of the different haplotypes for establishment on different substrata as the network of H. physodes indicates recombination within the ITS region which may be frequent enough to make this primarily clonally reproducing species to behave like a sexual species.