In order to investigate social structure, 11 years of individual photo-identification data of bottlenose dolphin were analysed. We examined the type of association indices between pairs of identified individuals; the patterns of affiliation between individual dolphins and the probabilities of association between individuals over time. Between 2001 and 2012, there were 272 encounters which resulted in the identification of 501 individuals. The discovery curve resulting from the photo-identification analysis indicated an open population with regular recruitment of new individuals. All individuals were found to be associated at an association index of <0.05. A total of 291 individuals recorded from 2004 to 2012 were used to assess the temporal pattern of the social structure. The model fit to the Standardized Lagged Association Rate (SLAR) that best described the studied bottlenose dolphin population was ‘casual acquaintances’, and the analysis of associations over time showed a decreasing SLAR curve that falls until reaching the null rate, confirming random associations. The decline of the SLAR curve after ~500 days (1.4 years) suggests disassociation over that time period which can be explained by demographic events such as mortality or emigration. In an open ocean habitat like Madeira this is not unexpected, as there are neither geographic boundaries nor enclosed environments. This population presented a dynamic and fluctuating social structure, where groups change in size and composition. In future conservation efforts this population should be considered as one large community, where individuals associate, disassociate and reassociate with each other over time.

We examined the benthic macroinfauna at three strata during two seasons (winter and summer) on two sandy beaches (dissipative and reflective) in south-eastern Brazil. The hypothesis raised is that effects of morphodynamics and zonation determine the structure of macroinfauna, with dissipative beaches having comparatively higher species richness and density than the reflective beaches. Flamengo beach (dissipative) had higher species richness but lower density compared to Grumari beach (reflective). A high dissimilarity in assemblage structure (91.75%) was detected between the two beaches. Zonation in the occurrence of macroinfauna was detected for the two beaches in the two examined seasons. At Grumari beach, Emerita brasiliensis occurred mainly in stratum 1 (intertidal swept zone) while Saccocirus sp. occurred in stratum 2 (infralittoral at 0.5 m depth), whereas at Flamengo beach E. brasiliensis and Enoploides sp. had the highest density in stratum 1 (intertidal swept zone) whereas Scolelepis goodbodyi and Donax uncinata dominated in stratum 3 (infralittoral at 1.0 m depth). Scolelepis goodbodyi, Dispio uncinata, Enoploides sp., Nematoda and Trileptium sp. were associated with higher a Dean parameter and content of organic matter at Flamengo beach. In contrast, Hastula sp., Donax sp., Pisionidens indica, Hemipodus californiensis, Saccocirus sp. and Phyllodocidae were associated with the higher wave period and grain size of Grumari beach. The hypothesis that macroinfauna structure differs between the beaches and strata was confirmed, with the dissipative beaches having comparatively higher richness but lower density than the reflective beaches.

Marine gastropods are consumed worldwide due to their nutritional quality, having important economic value in international markets. In the gulfs of Northern Patagonia (Argentina), marine gastropods are captured as complementary resources during bivalve artisanal fisheries. In this study, we determined the biochemical composition during the reproductive cycle of four edible marine gastropods abundant along the South-western Atlantic coast: Odontocymbiola magellanica, Buccinanops deformis, Buccinanops cochlidium and Trophon geversianus. All the studied species presented high protein (36–70.8%), low lipids (0.02–1.50%) and intermediate glycogen content (3.22–14.08%). The main oviposition season was during spring and summer. The mean nutritional values indicate that the species studied provide a good source of nutrients appropriate to the human diet, reaffirming their value as a commercial resource. Taking into account the nutritional contribution and the reproductive season, the best period for the capture of these resources is during summer for O. magellanica and T. geversianus, and during autumn for B. deformis and B. cochlidium. This work will help promote the consumption of Patagonian gastropods while ensuring their responsible capture, contributing to the sustainability of these valuable resources.

Ice algae have successfully adapted to the extreme environmental conditions in the Antarctic, however the underlying mechanisms involved in the regulation and response of thylakoid membranes and chloroplast to low-temperature stress are still not well understood. In this study, changes in pigment concentrations, lipids, fatty acids and pigment protein complexes in thylakoid membranes and chloroplast after exposure to low temperature conditions were investigated using the Antarctic ice algae Chlamydomonas sp. ICE-L. Results showed that the chloroplasts of Chlamydomonas sp. ICE-L are distributed throughout the cell except in the nuclear region in the form of thylakoid lamellas which exists in the gap between organelles and the starch granules. Also, the structure of mitochondria has no obvious change after cold stress. Concentrations of Chl a, Chl b, monogalactosyl diacylglycerol, digalactosyl diacylglycerol and fatty acids were also observed to exhibit changes with temperature, suggesting possible adaptations to cold environments. The light harvesting complex, lutein and β-carotene played an important role for adaptation of ICE-L, and increasing of monogalactosyl diacylglycerol and digalactosyl diacylglycerol improved the overall degree of unsaturation of thylakoid membranes, thereby maintaining liquidity of thylakoid membranes. The pigments, lipids, fatty acids and pigment-protein complexes maintained the stability of the thylakoid membranes and the normal physiological function of Chlamydomonas sp. ICE-L.

Sea urchins are key herbivores in many coastal ecosystems. The purple sea urchin, Heliocidaris erythrogramma, is widely distributed across temperate Australia where it exhibits considerable plasticity in feeding behaviour and ecophysiology. In this study we examined H. erythrogramma populations on subtidal reefs along ~4° of latitude in south-west Australia. We used a multi-factorial survey design to assess variability in H. erythrogramma abundances between locations (>200 km part), sites (≥1 km apart) and habitat types (reef flats and slopes). We also examined spatial variability in urchin size, condition (measured by gonad index), and the relative abundances of two co-occurring subspecies. Urchin densities were generally low and did not vary between locations, but did vary between habitat types and amongst sites. Site-level variability in urchin size and condition was also pronounced. The southernmost population comprised smaller individuals and greater relative abundance of the H. e. erythrogramma subspecies, which is abundant on the east coast of Australia. We observed no indication of population-level responses to a recent extreme warming event that impacted the wider ecology of the region, but further investigation into the effects of both gradual warming and short-term climatic events on the ecology of H. erythrogramma and other key herbivores is required.

Changes in weight, histology and visual appearance of ovaries from a field population of Pecten maximus (Pectinidae: Bivalvia) were followed for one year. Ovaries containing fully-grown oocytes were found throughout the year, though the degree of filling varied. Spawning activity of varying intensity occurred from late March to September. Recovery with increase in gonad index followed the spawning in spring, but there were no signs of gonad growth during a stepwise decline in gonad index from June to September. Gonad index increased to a new maximum between October and December. Oogenesis seemed to be active in filled ovaries throughout the year, and no classical resting period with empty gonads was seen. Prior to and during the spring phytoplankton bloom, recruitment of young oocytes appeared inhibited in some ovaries, leading to increased accumulation of large oocytes.

1. On storing, sea water suffers a decrease in pH value. The amount of change varies from that produced by adding 1·0 c.c. of N/100 acid to 100 c.c. of sea water, up to that due to adding about 2·5–3·0 c.c. The decrease is due to the production of carbonic acid by organisms.

2. The change corresponding to 1·0 c.c. of acid, as above, is equivalent to that produced by the complete oxidation of 3 milligrams per litre of a hexose sugar, which requires 3·2 mgrms. per litre of oxygen. This is the minimum value, from 8·0–9·6 mgrms. corresponds to the higher values of acid. Figures for oxygen consumption by estuarine waters, which are available for an approximate comparison, show that 1·5 mgrms. of oxygen is not often exceeded in estimations by means of alkaline permanganate. The highest of this series is 5·6 mgrms. It is suggested that the different results given by the two methods are due to the fact that respiratory changes taking place in the water during storage set free much of the organically combined carbon before the oxidation by permanganate has been started. Determinations on freshly drawn filtered sea water give, according to Raben, 7·5 mgrms. of hexose or 8·0 mgrms. of oxygen consumed.

3. It is probable that the change in pH value on storing indicates the amount of plankton present, at any rate when sewerage contamination is negligible. It appears that water near the surface, at 20–25 metres and sometimes at the bottom, 70 metres, is particularly subject to change during storage. Four cases out of seven showed marked decreases in pH value at 20–25 metres, and two others exhibited the change to a less marked degree.

4. The total amount of carbon, reckoned as hexose, which is set free during storage by respiration in sea water at E1 is about twice that photosynthesised between July and December, taking for this the minimum value 3 mgrms. per litre, namely a total of 6 mgrms. per litre. Considering the column of water from bottom to surface, this is equivalent to about 500,000 kilograms per square kilometre in the English Channel off Plymouth.

One of the lobsters kept in the tanks of the Plymouth Laboratory moulted on the night of 2 0 August 1940. This opportunity was taken to examine the changes in water content and osmotic pressure of the freshly moulted as compared with unmoulted lobsters. Though only one recently moulted individual has been examined, the results seem to be worthy of note since so far as we are aware no data are available on the subject in regard to Homarus. The biology of moulting among lobsters has received the attention of many investigators (vide Herrick (1895) and Drach (1939) for summary and literature).

The water content was determined by distilling the fresh lobster together with a known weight of sea water under xylol. This method is a modification of that of Dean and Stark which one of us (A. G. L.) has tried on a number of animals and found to give accurate results. The density was estimated by a modification of a method previously described (Lowndes, 1938). Osmotic pressure of blood and the external medium were measured by Baldes's (1934) modification of the Hill thermoelectric technique, as employed by one of us (N. K. P.) in the study of prawns and other crustaceans. The water content of the moulted skin was calculated from its dry weight taken after dehydrating in a hot air oven for 48 hr. at 105° C. Osmotic pressure was measured 17±6 hr. after moult; density and water content after 34±6hr. The temperature of sea water at which the density was estimated was 17° C.

Limpets (Patella spp.) are marine gastropods that inhabit rocky shores along the coasts of Europe, the Mediterranean, Macaronesia and the north-west coast of Africa. Being considered key species, limpets have an important role regulating algal assemblages in coastal communities. The goal of this work was to evaluate the influence of sea temperature on the respiration rate of four limpet species occurring in mainland Portugal, in line with predictions from the metabolic theory of ecology. The individuals were collected from rocky shores in Portugal and exposed to sea temperatures ranging from 6–28°C for respiration rate assessments. Following the estimation of the relationship between oxygen consumption and temperature the activation energy was calculated. In parallel, low and high thermal thresholds were determined for three of the species. The results indicated that P. ulyssiponensis oxygen consumption increased linearly with sea temperature and the remaining species presented the same tendency. The values of activation energy ranged between 0.33–0.76 eV. For P. ulyssiponensis, the highest activation energy indicated that this species is more sensitive to temperature variations while for the tested temperatures it presented a higher thermal tolerance limit than the other species. Such findings indicate that P. ulyssiponensis is the most susceptible of these species to climate change, in line with the tolerance–plasticity trade-off hypothesis. This work provides a good starting point for understanding the effect of sea temperature on oxygen consumption in Patella spp. and for comprehending sensitivity of limpets to temperature increases under future climate change scenarios.

The diversity and distribution of the Bivalvia fauna is examined in the various seas of Greek territorial waters. There is a statistically significant correlation between the bibliographical sources and the recorded variety of Bivalvia at any given area, with the deeper areas containing fewer species. Attention is given to some species ‘introduced’ into the area.

Cluster analysis, based on the species present at 30 regions which represent distinct geographical and ecological units, do not show any differentiation that corresponds to a geographical pattern. However, a distinct group is associated with the deeper open areas, which suggests that ecological parameters, such as depth and degree of enclosure, play an important role in the distribution of species.

The feeding habits of Polyacanthonotus rissoanus, the sixth most abundant species below 1000 m on the deep slope of the Catalan Sea (western Mediterranean), were studied in the Mediterranean Sea. Samples were obtained at depths between 1000 and 2250 m. Diet was analysed for two seasons (summer and autumn) and three different bathymetric strata. The most important food items found were small epibenthic and suprabenthic crustaceans and polychaetes, and occasionally other groups such as Priapulida, Gastropoda and Foraminifera. At 1000–1425 m, the mysids were preferential prey, while in summer at all depths analysed, isopods were a dominant prey. Polychaetes have certain incidence in the diet only at 1000–1425 m, being a dominant prey in autumn. Individuals at the 1000–1425 m depth ingest larger numbers of prey of higher average sizes than those at 1425–2250 m. The scarcity of resources below 1200–1400 m resulted in diversification of diet and encouraged preying on deposited foraminiferans, molluscs or moving copepods.

The taxonomy of six species and one subspecies of Natatolana, which have previously been recorded from the north Atlantic Ocean and Mediterranean Sea, is reviewed. Natatolana caeca, N. gallica, N. gracilis and N. neglecta are redescribed from the type material. The location of possible type material of N. borealis is reported and a redescription of this species is provided, based on material from the type locality. Natatolana neglecta var. imicola is recognized as a valid species. Natatolana schtnidti is regarded as a junior synonym of N. imicola based on comparison of type material and this material is used to redescribe the species. Distribution records for these species are summarized from examination of material held in various collections and a key to separate these species is provided.

Previous experiments with the comatulid Himerometra robustipinna (Carpenter, 1881) demonstrated intensive host-to-host migration processes for almost all symbiotic species both within host aggregations and among hosts separated by several metres. The aim of this study was to check the ability of symbionts to complete long-distance migrations, by means of two in situ experiments which depopulated the crinoid host. Two different sets of field experiments were set up: exposure of depopulated crinoids (set 1) on stony ‘islands’ isolated from native crinoid assemblages by sandy substrate, and (set 2) in cages suspended in the water column. Hosts from set 1 were exposed for 1, 2, 3 and 4 weeks to assess whether substrate has an influence on the symbionts' long-distance migrations. In set 2 cages were exposed for 10–11 days, aiming to check whether symbionts were able to disperse through the water column with currents. These experiments allow the conclusion that post-settled symbionts can actively migrate among their hosts. Symbionts are able to reach their hosts by employing two different ‘transport corridors’, by drifting or swimming in water column, and by moving on the bottom. Comparison of experimental results allows the division of symbionts into two conventional groups according to the dispersal ability of their post-settled stages: (1) species able to complete long-distance migrations, (2) species unable to migrate or having limited dispersal ability. The finding of the free-living shrimp Periclimenes diversipes Kemp, 1922 in set 2 raises the question about the factors that affect such a high degree of specialization of crinoid assemblages.

The comparative research programme on harpacticoid copepod assemblages of the west coast of Ireland and northern Finistere began in 1982. During 1981 in Galway, D. Jackson sampled three sandy beaches around Galway Bay (Figure 1), Grattan Road Strand, Silver Strand and An Poll Brean (on Mweenish Island) near Carna (simply called Carna in the following text) and was preparing his PhD thesis (Jackson, 1985). Between 1978 and 1984 in Brittany, P. Bodin had been conducting a long-term ecological survey (Bodin, 1988) of three sandy beaches polluted by the 'Amoco Cadiz' oil spill; Brouennou, Corn ar Gazel and Kersaint (Figure 2). As these six beaches shared common characteristics of granulometry, salinity, temperature and hydrodynamics, it was decided to undertake a comparative study of the systematics, ecology and biology of their harpacticoid copepod assemblages.

This study determined the spatial and seasonal density, number of genera, genera composition, maturity index and trophic structure of free-living nematode assemblages in the subtidal waters of the northern Beibu Gulf, South China Sea, and explored whether these five biotic characteristics were related to various environmental variables. Based on the data derived from samples collected seasonally at nine stations, the mean densities of nematodes decreased from alongshore to offshore station in the northern Beibu Gulf. However, the number of nematode genera increased from alongshore to offshore station. Non-parametric multidimensional scaling analysis showed no clear seasonal changes for nematode assemblages in most sampling stations. Higher densities of the genera Elzalia and Tricoma were found in offshore sampling stations, and a higher density of the genus Cheironchus was found in alongshore sampling stations. The mean percentage of each feeding type compared to the total numbers was highest in epigrowth feeders (2A), second highest in non-selective deposit feeders (1B), third highest in predators (2B), and lowest in selective deposit feeders (1A). There were significant negative correlations between nematode density and water depth and temperature; significant positive correlations between the number of nematode genera and water depth and salinity; and significant negative correlation between the maturity index of the nematode assemblage and organic matter. BIOENV analysis indicated that water depth, salinity, pH, median sediment particle size and organic matter were the most correlated combination of environmental variables affecting the nematode assemblages.

The sea cucumber Apostichopus japonicus is a deposit-feeder and vital for marine benthic ecosystems. Hypoxia can influence the behaviour and even lead to massive mortality in A. japonicus in the wild. It is important to understand the molecular responses of A. japonicus when exposed to acute changes in dissolved oxygen (DO) concentration. In this study, RNA-seq provided a general overview of the gene expression profiles of the respiratory tree of A. japonicus exposed to DO of 8 mg l−1 (DO8), 4 mg l−1 (DO4) and 2 mg l−1 (DO2) conditions. Differentially expressed genes (DEGs) screening with the NOISeq method identified 51, 59 and 61 DEGs according to the criteria of fold change ≥2 and divergence probability ≥0.8 in the comparisons of DO2 vs DO4, DO2 vs DO8 and DO4 vs DO8, respectively. Gene ontology analysis showed that ‘cellular process’ and ‘binding’ had the most enriched DEGs in the categories of ‘biological process’ and ‘molecular function’, respectively (catalytic activity also had the most enriched DEGs in the category of ‘molecular function’ based on the comparison of DO2 vs DO8), while ‘cell’ and ‘cell part’ had the most enriched DEGs in the category of ‘cellular component’. The DEGs were mapped to 79, 81 and 104 pathways in the KEGG database, and 8, 29 and 16 pathways were significantly enriched, respectively. The DO-specific DEGs identified in this study of the respiratory tree are important targets for further research into the biochemical mechanisms involved in the response of the sea cucumber to changes in the DO concentration.

Investigating the spatio-temporal patterns of planktonic larvae is fundamental to studies regarding stock assessment and larval dispersal of commercial and non-commercial, i.e. invasive or rare marine invertebrates. Because of the difficulty involved in morphological identification of marine invertebrate larvae, various molecular methods based on PCR have been used to enhance taxonomic resolution. In previous studies, different methods for the preservation or pretreatment of larvae were applied in each case. However, no comparative studies have been conducted to determine the optimal method for PCR testing for bivalve larvae, and no information is available regarding the selection of an appropriate method.

This study compared the PCR success rate of 6 pretreatment methods for larvae of the Mediterranean blue mussel, which was preserved using different fixatives (70% ethanol, 100% ethanol, 70% acetone and 10% formalin). The results revealed that the success rate of PCR was different for each pretreatment; moreover, the use of ammonium sulphate and Tween 20 buffer with proteinase K digestion was found to be the most effective method. Some pretreatments showed lower success rates for long-fixed larvae than for short-fixed larvae for formalin-fixed larvae; however, the success rate of PCR amplification for ethanol-fixed larvae pretreated by this method did not decrease through 1-year fixation. In addition, this pretreatment showed a high success rate for different fixation periods. These findings suggest that the selection of the pretreatment method is critically important for successfully amplifying larval DNA and that the pretreatment involving the use of ammonium sulphate prior to PCR amplification enables the use of fixatives for preserving bivalve larvae. This method will be utilized in various field studies and molecular genetic studies.

The examination of five females of the deep-benthic octopus Graneledone pacifica—a large-egged species: mature ovarian egg length >20 mm—showed that their developing oocyte size-distribution was normal in two specimens at an early maturation stage (largest oocyte length=3 mm), bimodal in two specimens at a more advanced stage (largest oocyte length=6 and 8 mm, respectively), three-modal in the farthest advanced stage specimen (largest oocyte length=14 mm). According to the literature, the simultaneous occurrence of oocyte cohorts at different oogenic stages, including a distinct cohort of oocytes at an advanced maturing stage in one specimen, suggests that G. pacifica is a multiple spawner.

This study focuses on the dolphins populating the water between Gibraltar and Algeciras in the south Iberian Peninsula, an area subjected to pressure due to high human activity. The area is considered an important feeding and breeding ground for common dolphins (Delphinus delphis). Due to the degree of residence of some specimens, and the large gap in knowledge about the evolution of wounds in D. delphis specimens with lacerations, this work sought to perform the following analyses: identify lacerated individuals; characterize sequences of ‘before – during – after’ with respect to the occurrence of lacerations; and associate the type of injury with its severity. This work will inform future studies by expanding a database on injured individuals and contribute to periodical monitoring of specimens that frequent these geographic areas. Between 2013 and 2017, we were able to track the healing process of five injured individuals of common dolphins from a whale-watching platform thanks to photo identification. The animals exhibited fresh external wounds from different sources. In the majority of individuals, the wound-healing processes lasted 3–21 weeks. The frequency with which sightings are made and knowledge about the local population will help track injured animals, follow their wound evolution, and document their survival rates. The documented injuries inflicted by human interactions described in this paper may include fishing interactions and propeller strikes, probably as a consequence of the high intensity of recreational fishing and whale-watching activities in the area.

Platynereis dumerilii is an emerging model system for both comparative developmental biology and ecotoxicology. As such it would be extremely valuable to be able to map the location of genes and markers in its genome, in order to understand how the genome changes or has changed, either due to chemical and environmental insults or during evolution. Here we report the adaptation of the technique of chromosomal fluorescence in situ hybridization (FISH) to P. dumerilii for the localization of single-copy genes. Also the duplicated ribosomal gene cluster of this annelid is more reliably revealed with FISH than with the previous technique of silver staining. This duplicated ribosomal cluster correlates with polymorphisms in the internal transcribed spacer (ITS) regions, which has implications for the use of these regions in phylogenetic or population biology work.