Understanding pesticide metabolism in plants and microorganisms is necessary for pesticide development, for safe and efficient use, as well as for developing pesticide bioremediation strategies for contaminated soil and water. Pesticide biotransformation may occur via multistep processes known as metabolism or cometabolism. Cometabolism is the biotransformation of an organic compound that is not used as an energy source or as a constitutive element of the organism. Individual reactions of degradation–detoxification pathways include oxidation, reduction, hydrolysis, and conjugation. Metabolic pathway diversity depends on the chemical structure of the xenobiotic compound, the organism, environmental conditions, metabolic factors, and the regulating expression of these biochemical pathways. Knowledge of these enzymatic processes, especially concepts related to pesticide mechanism of action, resistance, selectivity, tolerance, and environmental fate, has advanced our understanding of pesticide science, and of plant and microbial biochemistry and physiology. There are some fundamental similarities and differences between plant and microbial pesticide metabolism. In this review, directed to researchers in weed science, we present concepts that were discussed at a symposium of the American Chemical Society (ACS) in 1999 and in the subsequent book Pesticide Biotransformation in Plants and Microorganism: Similarities and Divergences, edited by J. C. Hall, R. E. Hoagland, and R. M. Zablotowicz, and published by Oxford University Press, 2001.

A field study was conducted during 2000 and 2001 at Stoneville, MS, to determine the effects of isopropylamine, trimethylsulfonium (Tms), diammonium, and aminomethanamide dihydrogen tetraoxosulfate (Adt) salt formulations of glyphosate on weed control, growth, chlorophyll content, nodulation, nitrogen content, and grain yield in glyphosate-resistant soybean and to assess potential glyphosate accumulation in soybean nodules. Glyphosate-Tms and glyphosate-Adt injured soybean, and visible injury ranged from 29 to 38% 2 d after late postemergence (LPOST) application; however, soybean recovered by 14 d. Glyphosate formulations had no effect on chlorophyll content, root and shoot dry weight, or nodule number but reduced nodule biomass by 21 to 28% 14 d LPOST. Glyphosate levels in nodules from treated plants ranged from 39 to 147 ng g−1 (dry weight), and leghemoglobin content was reduced by as much as 10%. Control of five predominant weed species 14 d after LPOST was > 83% with one application and > 96% with two applications regardless of the glyphosate salts used. Soybean yields were generally higher with two applications than with one application regardless of glyphosate formulation. These results indicate that soybean injury and inhibition of nodule development with certain glyphosate formulations can occur, but soybean has the potential to recover from glyphosate stress.

Arabidopsis complementary DNA (cDNA) microarrays were hybridized with labeled cDNA from mature leaves and emerging tillers of wild oat to determine if they could identify gene expression profiles in distantly related species. More than 23% of the > 11,000 cDNAs on the array hybridized to the wild oat probe. Transcription patterns detected by hybridization to the arrays are indicators for physiological processes in the tissues tested. Coordinated expression patterns for these genes in Arabidopsis indicate common signals involved in their regulation. The results demonstrate that probing cDNA-based arrays from well-characterized species can provide valuable insight into the signal transduction processes regulating growth and development of poorly characterized species.

Laboratory experiments were conducted to evaluate absorption, translocation, and metabolism of AE F130060 03 in wheat, barley, and Italian ryegrass. An additional objective was to evaluate how combinations of AE F130060 03 with dicamba affect absorption, translocation, and metabolism in wheat, barley, and Italian ryegrass. Experiments were conducted in a completely randomized design, and data were subjected to a factorial analysis. The factors included for analysis were plant type, time, and presence or absence of dicamba. Italian ryegrass absorbed 2.5, 2.0, and 1.5 times the amount of applied radioactivity 24, 48, and 96 h after treatment (HAT), respectively, compared with wheat or barley. Translocation of radiolabeled AE F130060 03 from the treated leaf blade was low and did not differ among wheat, barley, or Italian ryegrass. The rates of AE F130060 03 metabolism by the two cereal crops and Italian ryegrass were different. Ninety-six HAT, the total absorbed radioactivity metabolized by wheat, barley, and Italian ryegrass was 67, 51, and 34%, respectively. Conversely, 96 HAT, the levels of nonmetabolized AE F130060 03 were highest in Italian ryegrass, intermediate in barley, and lowest in wheat. The lower absorption of herbicide and a more rapid rate of metabolism by wheat and barley in comparison with Italian ryegrass most likely account for differential selectivity among the three plant species. Dicamba did not influence translocation or metabolism in wheat, barley, or Italian ryegrass.

Greenhouse and laboratory experiments were conducted to investigate the response of winter wheat, and two diclofop-methyl–sensitive (OR and KG) and four diclofop-methyl–resistant (EP, GT, RBG, and JB) Italian ryegrass biotypes to the experimental herbicide mixture AE F130060 03 (an 8.3:1.7 mixture of the experimental sulfonylurea herbicides AE F130060 00 and AE F115008 00). AE F130060 03 at 15 or 18 g ha−1 without the safener AE F107892 reduced biomass of winter wheat 10 to 14%, whereas applications made with AE F107892 did not reduce wheat biomass. AE F130060 03 at 15 or 18 g ai ha−1 was more effective than diclofop-methyl in reducing biomass of one diclofop-methyl–sensitive Italian ryegrass biotype and all four diclofop-methyl–resistant biotypes. However, differential responses to AE F130060 03 at 15 and 18 g ha−1 occurred among diclofop-methyl–resistant biotypes. AE F130060 03 at 15 or 18 g ha−1 reduced biomass of OR, KG, EP, and GT from 61 to 84% but reduced biomass of RBG and JB biotypes only 35 to 52%. Absorption, translocation, and metabolism experiments were conducted to further investigate differential response of diclofop-methyl–sensitive KG and diclofop-methyl–resistant JB to AE F130060 00. Absorption, translocation, and metabolism of AE F130060 00 in winter wheat treated with or without the herbicide safener AE F107892 were also included for comparison. Foliar absorption of [14C]AE F130060 00 was influenced only by plant species because Italian ryegrass biotypes absorbed at least three times more AE F130060 00 than did wheat 12, 36, and 72 h after treatment (HAT). No more than 9% of absorbed radioactivity translocated into shoots and roots of either species during the experiment. Greatest overall metabolism occurred in winter wheat treated with the safener AE F107892. Seventy-two HAT, relative amounts of parent AE F130060 00 in Italian ryegrass biotypes were nearly 1.8 times greater than that in wheat that received AE F107892 and nearly 1.5 times greater than that in unsafened wheat. However, obvious differences in herbicide metabolism between diclofop-methyl–sensitive KG and diclofop-methyl–resistant JB were not evident. We hypothesize that differential sensitivity to AE F130060 00 in these biotypes is most likely due to a less sensitive acetolactate synthase, although further research is required to confirm this hypothesis.

A study was conducted near Garden City, KS, under irrigated conditions to determine the effect of full-season Palmer amaranth infestation on corn water use efficiency and light interception in a fully developed corn canopy. Palmer amaranth at densities of 0, 0.5, 1, 2, 4, and 8 plants m−1 was established at corn planting in 1996 and 1997 and at two locations in 1998. Soil water was monitored 240 cm deep in 30-cm increments with a neutron probe each year and at each location every 10 d. Photosynthetic photon flux was measured in 1997 and 1998 by using a circular and a linear quantum sensor for above canopy and in four 50-cm increments for within canopy, respectively. Palmer amaranth reduced corn yield from 11 to 91% as density increased from 0.5 to 8 plants m−1. Water use efficiency of corn declined with increased Palmer amaranth density. Regardless of Palmer amaranth density, soil water extraction was greatest in the top 30 cm of the soil profile. The pattern of corn leaf area distribution was similar across Palmer amaranth densities, with 15, 70 to 75, and 5 to 15% of the total leaf area occurring 1.5 m, 0.5 to 1.5 m, and 0 to 0.5 m above the ground, respectively. In weed-free corn, over 60% of light was intercepted from 0.5 to 1.5 m above the ground. In contrast, in mixed canopies 60 to 80% of light was intercepted 1 m above the ground, where 80% of Palmer amaranth leaf area was concentrated. Under the conditions of this study, water was not a limiting factor. The effect of Palmer amaranth density on total light interception was not significant. However, within each treatment, light interception at different heights differed, emphasizing the importance of evaluating the vertical distribution of light through the canopy to assess the effect of weed height on light competition.

Information on responses of weeds to various soil fertility levels is required to develop fertilizer management strategies as components of integrated weed management programs. A controlled environment study was conducted to determine shoot and root growth response of 23 agricultural weeds to N fertilizer applied at 0, 40, 80, 120, 180, or 240 mg kg−1 soil. Wheat and canola were included as control species. Shoot and root growth of all weeds increased with added N, but the magnitude of the response varied greatly among weed species. Many weeds exhibited similar or greater responses in shoot and root biomass to increasing amounts of soil N, compared with wheat or canola. With increasing amounts of N, 15 weed species showed a greater increase in shoot biomass, and 8 species showed a greater increase in root biomass, compared with wheat. Ten weed species exhibited increases in shoot biomass similar to that exhibited by canola, and five weed species showed greater increases in root biomass than did canola, as N dose was increased. All crop and weed species extracted > 80% of available N at low soil N levels. At the highest N dose, 17 of 23 weed species took up similar or greater amounts of soil N than did wheat, and 6 weed species took up N in amounts similar to that taken up by canola. These findings have significant implications as to how soil fertility affects crop–weed competition. The high responsiveness of many weed species to N may be a weakness to be exploited through development of fertilizer management methods that enhance crop competitiveness with weeds.

Field experiments were conducted in 1999 and 2000 in northern Greece to study interference between johnsongrass from seed or rhizomes and three corn hybrids (‘Dunia’, ‘Papea’, and ‘Costanza’). Fresh weight of each corn hybrid was lower with greater duration of johnsongrass interference, and it was lower for corn grown with johnsongrass from rhizomes than from seed. Corn-silage yield and corn-grain yield were 10 to 14% less than weed-free corn yield when grown with johnsongrass plants from rhizomes 4 wk after sowing (WAS) or from seed 6 WAS. Regression analysis indicated that a corn-grain yield loss of 10% was associated with an interference period of 2.6 to 2.7 WAS for johnsongrass from rhizomes and 4.3 to 5.1 WAS for johnsongrass from seed compared with weed-free corn. Corn-silage yield with season-long interference by johnsongrass from rhizomes or from seed was 83 and 62% lower, respectively, than was weed-free corn yield. Similarly, corn-grain yield with season-long interference by johnsongrass from rhizomes or from seed was 88 and 57% lower, respectively, than was the yield from weed-free corn. Corn-ear length of each hybrid was more affected by johnsongrass interference than was 1,000-seed weight. Johnsongrass plants from rhizomes emerged earlier, grew faster, and produced greater fresh weight than did plants from seed. However, fresh weight and stem number of johnsongrass plants from either seed or rhizomes were not affected by corn hybrids.

An improved understanding of the effects of nitrogen (N) on crop–weed interactions is needed for the development of integrated weed management systems where responsible use of N fertilizers is considered. Field experiments conducted in 1999 and 2000 at two locations in eastern Nebraska quantify the effects of N and increasing duration of weed interference on corn growth and development. A naturally occurring population of weeds was allowed to compete with the corn crop for increasing lengths of time and at three rates of N application (0, 60, and 120 kg N ha−1). Weed interference and withholding applied N increased the time to 50% silking by an average of 3.9 and 2.9 d, respectively. Regardless of treatments, relative growth rates of corn leaf area and biomass were maximized between the V1 and V2 growth stages of corn and increased linearly with N rate but were affected to a lesser extent by weed presence. The improvement in early season corn growth with addition of N resulted in greater leaf area, biomass, and height, which improved the competitive ability of corn against weeds. Reductions in maximum corn leaf area and height due to weed interference usually began earlier and were more extensive at reduced rates of N. Partitioning of biomass to reproductive structures increased with N during reproductive stages, likely contributing to greater harvest indices at the end of the season. Results from this study indicate that the effects of N fertilization on early-season crop growth provided a competitive advantage for corn relative to weeds, thereby increasing the length of time that weeds could compete with a crop before removal was required, but further research is needed to identify mechanisms regarding improved crop tolerance to weeds.

Because of interest in monitoring crop response to weed interference, greenhouse experiments were conducted to evaluate interference of purple and yellow nutsedge on the growth, development, and spectral response of cotton and soybean. Cotton fresh weight was reduced 9 to 42% compared with the control when grown with yellow and purple nutsedge. Fresh weight of soybean was reduced 27 to 60% when it emerged simultaneously with yellow nutsedge and 45 to 63% when it emerged 7 d after yellow nutsedge. Soybean fresh weight was reduced 30 to 35% when it emerged simultaneously with purple nutsedge and 44 to 72% when it emerged 7 d after purple nutsedge. Reflectance data were analyzed using wavelet transformation techniques with the HAAR mother wavelet. Nine extracted features from the cotton and soybean leaf reflectance measurements were used to classify single-leaf cotton and soybean reflectance measurements to predict whether cotton or soybean was growing in the presence or absence of purple and yellow nutsedge. After training the system, the ability to separate leaf reflectance measurements of crops growing weed free from those growing in the presence of purple and yellow nutsedge was tested using cross-validation with the nearest mean classifier. Cross-validation accuracy results for cotton were 62 to 70%. Cross-validation accuracy for soybean and yellow nutsedge was similar, regardless of emergence, and ranged from 60 to 71%. Features extracted from the soybean reflectance measurements were not as effective in classifying soybean leaf reflectance measurements based on the presence or absence of purple nutsedge. A decrease in accuracy was observed for both simultaneous and delayed soybean emergence in purple nutsedge fresh weight categories from more than 2,560 g to more than 3,420 g. Overall, the system correctly classified soybean emerging simultaneously with purple nutsedge 58 to 74% and soybean emerging 7 d after purple nutsedge 53 to 67%. These results indicate the potential of differentiating crops under stress using spectral reflectance, although refinements to the system must be made before it is field ready.

In wetlands, drought or managed late-summer drawdowns create exposed mudflats that provide an excellent substrate for germination of purple loosestrife seeds. If late-emerging purple loosestrife seedlings survive the winter, new or expanding populations of purple loosestrife will result. Spring survival was determined for overwintered purple loosestrife seedlings from seeds planted at weekly intervals in late summer or fall of the previous year. Seedlings of purple loosestrife that emerged from late July to early August had the greatest survival rates and the greatest shoot dry weight, and they were the tallest the following spring. However, 37% of purple loosestrife seedlings that emerged in late August, although stunted, generated a crown that was able to overwinter successfully and regrow the following spring. The number of growing degree days accumulated from planting date to October 6 (the average date of first frost for Minneapolis and St. Paul, MN) was 1,424 for seedlings from seeds planted on July 21 but only 219 for seedlings from seeds planted on September 15. Purple loosestrife seedlings that emerge during late summer through early September in Minnesota may survive the winter to create additional purple loosestrife weed problems in wetland mudflats caused by artificial drawdowns or droughts.

Relationships among weed seed rain, soil seedbank, and seedling recruitment in no-tillage systems were studied from July 1993 to May 1996. Multiple regression analysis indicated that seedling recruitment of only six of the 25 weed species present was correlated with seed rain samples from the previous autumn, spring soil seedbank samples, or a combination of the two. However, seedling recruitment of the dominant annual grasses (yellow foxtail, giant foxtail, and fall panicum in Field 1–1994, Field 2–1995, and Field 3–1996, respectively) was related to seedbank populations or a combination of seedbank and seed rain densities. These grasses accounted for at least 32% of the emerged seedlings, 12 to 78% of the seedbank, and 16 to 77% of the seed rain. Seedling recruitment of large crabgrass and two broadleaf species, Virginia copperleaf and wild carrot, also were described by seedbank densities or a combination of seedbank and seed rain densities. However, both the broadleaf species were minor components of the cropping system, representing ≤ 4% of all seedlings. In each year, the sum of all weeds in the seedbank exceeded 1,300 seeds m−2 (0 to 10 cm deep). The fraction of the total seedbank that emerged each year ranged from 3 to 17%, but there was great variability among species. The aforementioned dominant grasses ranged in emergence from 3 to 25% of their seedbanks. Emergence of other species ranged from a low of 1% for common lambsquarters up to 41% for large crabgrass. Prediction of seedling recruitment from seed rain or seedbank densities was variable; however, combining both components improved the fit of regression describing seedling recruitment.

Early weed removal in canola gives the crop a competitive advantage over weeds and is therefore widely recommended for optimal crop production, but no studies have been undertaken previously to determine the effect of this practice on insect infestations. Four field experiments were conducted at Lacombe and Beaverlodge, AB, Canada, in 1999–2001 for a total of 10 site-years to determine the effect of time of weed removal on root maggot (Delia spp.) egg deposition and larval damage to taproots. The experiments also investigated the effects of other factors such as cultivar, seeding date, herbicide application rate, fertilizer rate and placement, and use of a nitrification inhibitor on root maggot damage and oviposition. Damage to taproots and oviposition declined by approximately 6 and 23%, respectively, with a delay in weed removal from the two- to six-leaf stage of canola development. The effect of time of weed removal on root maggot damage and egg density sometimes varied with site and cultivar, but the main effect of time of weed removal was more prominent (smaller P values) than interactions with site. The most plausible explanation for this effect relates to the behavioral sequence of events that precedes oviposition in mated, gravid female flies. Heterogeneous environments, such as weedy backgrounds in canola plantings, minimize opportunities for females of Delia spp. to complete the behavioral sequence required for oviposition, leading to reduced infestation levels in weedy systems. However, yield improvements achieved with early weed removal exceeded the yield benefit derived by lowered root maggot pressure when weeds were removed later. Nevertheless, current efforts to reduce pesticide use in agriculture may promote broader adoption of cultural control strategies for weed and root maggot management. In some situations, it may then be appropriate to ameliorate root maggot damage by maintaining some weedy background.

Smellmelon is becoming a problem weed in southern Texas and Louisiana cotton-producing areas. Experiments evaluating the density and duration of smellmelon competition are necessary for the recommendation of appropriate control practices to minimize yield loss. In 1999 and 2000, field experiments were initiated to determine the density, critical period of competition, and potential control measures for smellmelon in cotton. Although the degree of competition differed between the years, similar trends were observed with respect to smellmelon density. As few as 2 or 3 smellmelon plants 10 m−1 row reduced yield at least 17% each year. When densities were increased to 5 or 10 plants 10 m−1 row, yield reductions increased to at least 34%. Results from the duration of smellmelon competition in 1999 and 2000 indicated that cotton should remain smellmelon free for 1 to 7 wk after planting (WAP) and 2.5 to 6 WAP, respectively. Results from the control studies indicate that smellmelon size at application influences control. Early-season control strategies are necessary to reduce yield losses associated with smellmelon competition.

Pygmyflower is becoming increasingly abundant in conservation-tillage cropping systems of the Canadian Prairies. Increased knowledge of pygmyflower biology would facilitate development of integrated programs for its control. A controlled environment study was conducted to determine the combined effect of various soil temperature and soil water levels on pygmyflower emergence. Pygmyflower emerged at soil temperatures ranging from 10 to 25 C with optimal emergence at 15 C. Emergence was inhibited completely at 5 or 30 C. Pygmyflower emergence markedly declined as soil water content decreased. At progressively lower soil water levels of − 0.03, − 0.28, − 0.53, − 0.78, − 1.03, and − 1.53 MPa, pygmyflower emergence at 15 C was 71, 50, 49, 29, 24, and 15%, respectively. The interaction of warm and dry soils caused the greatest inhibition of pygmyflower emergence. Rate of pygmyflower emergence was reduced greatly by either lowering soil temperature or reducing soil water content. A decrease in soil temperature from 25 to 10 C increased the time to reach 50% emergence (ET50) by 9 to 14 d, whereas a decrease in soil water content from − 0.03 to − 1.53 MPa increased ET50 by 7 to 16 d. Results suggest that pygmyflower may pose the greatest problem in winter crops or early-planted spring crops. Information gained in this study will contribute to the development of an improved pygmyflower management program in annual cropping systems.

Yellow starthistle is a problematic invasive plant in the western United States. Attempts to control it often include the use of herbicides although herbicides can have detrimental effects on desired native species. We studied the effect of clopyralid on a native bunchgrass and vernal pool community in the Central Valley of California. Areas invaded by yellow starthistle were treated with clopyralid, and the presence and cover of all species was monitored for 2 yr. There were significant differences in species cover between treated and untreated plots 2 yr after treatment (P = 0.0001). These included a decline in cover of yellow starthistle and other native and exotic members of the Asteraceae and Apiaceae families in both years and a decline of exotic members of the Fabaceae family in the second year. There also were decreases in the frequency of the Asteraceae (P < 0.0001), Apiaceae (P < 0.05), Fabaceae (P < 0.05), and Polygonaceae (P < 0.05) families 1 yr after treatment, and the Asteraceae (P < 0.05) and Fabaceae (P < 0.05) families 2 yr after treatment. We also observed a significant negative effect of clopyralid on fecundity measures of a native Viola species during the first year of application (P = 0.0074). This effect did not persist into the second year, when violets were more common and produced more flowers in treated plots (0.02 < P < 0.05).

Field studies were conducted to compare the barnyardgrass suppression by four U.S. (‘Starbonnet’, ‘Kaybonnet’, ‘Lemont’, and ‘Cypress’) and three highly competitive, high-yielding Asian cultivars (‘PI 312777′, ‘Guichao’, and ‘Teqing’). The economic consequence of applying less than the recommended propanil rates to these cultivars was also evaluated. Grain yields increased, and barnyardgrass biomass decreased with increasing propanil rates. With or without propanil, the Asian rice cultivars consistently suppressed barnyardgrass more and consequently produced higher grain yields than did U.S. cultivars. The economic benefit derived from propanil application was less for Asian than for U.S. cultivars. Asian cultivars produced higher rough rice yields, resulting in higher net returns (not adjusted for milling) than did the commercial cultivars, but this advantage was usually reduced when adjusting for their lower milling yields. These results suggest that growing weed-suppressive Asian rice cultivars in conjunction with reduced herbicide rates could be an effective and economical weed management strategy for rice in the southern United States. However, first, their plant type and grain quality characteristics must be improved.

Greenhouse experiments were conducted to determine the effect of salinity, imazethapyr, and chlorimuron on weed growth. Five species, barnyardgrass, common cocklebur, ivyleaf morningglory, common purslane, and yellow nutsedge, were grown in potting soil and irrigated with nonsaline (EC ∼ 2 dS m−1) or sulfate-dominated saline (EC ∼ 7 dS m−1) nutrient solution. Plants were treated after emergence with imazethapyr (Pursuit formulation) at 70 g ae ha−1 or chlorimuron ethyl (Classic formulation) at 8.8 g ai ha−1. Results indicated that irrigation with saline water had no overall effect on the growth or survival of most tested weed species. Growth of yellow nutsedge (maximum height and stem diameter) was reduced for plants irrigated with saline water. Observed growth and survival trends in saline and nonsaline treatments were consistent with information on the herbicide label. Complete control of common purslane was not achieved by either chlorimuron or imazethapyr. Growth and survival of ivyleaf morningglory and yellow nutsedge were greater when plants were treated with imazethapyr than when treated with chlorimuron, whereas for barnyardgrass, growth and survival were significantly greater when plants were treated with chlorimuron. Both herbicides affected common cocklebur growth and survival in a similar way. For all tested species, most surviving plants were not vigorous and would not be highly competitive with crop plants. The results of these experiments suggest that weed control information mentioned on the labels for these herbicide formulations will not require modification for moderately saline soils.

GESTINF is a decision tool for postemergence weed control based on the equivalent density approach. Using observed weed densities just before treatment, the program estimates the economic return from the treatment, thus indicating whether to treat or not and, if a treatment is needed, the most economical weed control solution. Each treatment is also characterized by an environmental pollution index. GESTINF has been tested in wheat and soybeans on a farm in northeastern Italy with a total cropping area of 60 ha of wheat and 40 ha of soybean. For both crops, weed control followed the suggestions of GESTINF, whereas the remaining cropped areas were treated according to standard farm weed control practices. To compare the two weed control systems, weed control efficacy, average crop yield, and the extra time required for scouting and treatments were measured. In both crops, the treatments suggested by GESTINF showed good efficacy, and yields proved to be no different from those obtained in the fields treated with standard farm weed control practices. In most cases, GESTINF selected treatments with a lower environmental effect. The most critical point was the time required to scout the weed population that, in low-value crops or when very cheap treatments were available, reduced the weed control economic return. In wheat, GESTINF indicated that fewer fields needed to be treated than did the conventional system. However, extra costs due to both scouting and more expensive treatments balanced the savings obtained from nontreated areas. For soybean, the treatments adopted by the farm were based on a combination of pre- and postemergence practices. In this case, GESTINF identified cheaper but still efficacious treatments, significantly reducing the total cost of weed control.