We know surprisingly little about the fate of seeds of the Brazil nut tree (Bertholletia excelsa) under natural conditions. Here we investigate seed removal, predation and caching of Brazil nuts by scatter-hoarding rodents in the wet and dry seasons, based on an experimental approach using 900 thread-marked seeds. We tracked the fate of seeds handled by these animals to examine how seasonal food availability may influence caching rates, dispersal distances and cache longevity. Most seeds exposed to dispersal trials were removed by scatter-hoarders during the first week in both seasons and seeds were generally buried intact in single-seeded caches within 10 m of seed stations. Seeds were removed significantly faster and buried at greater distances during the dry season. The proportion of seeds buried intact was considerably higher in the wet season (74.4%) than in the dry season (38.2%). Most (99.4%) of the 881 primary caches monitored were recovered, but these had a significantly shorter lifetime in the dry season. Our results show that rodents are highly skilled at retrieving buried Brazil nuts and that caching behaviour appears to be affected by seasonal resource abundance. Reduced seed availability due to intensive harvest could potentially create a dry-season scenario where most seeds succumb to pre-dispersal predation, thereby adversely affecting the natural regeneration of Brazil nut trees.

To prevent seed losses from predation, plants have developed protective strategies. Seeds may utilize chemical or structural defences to deter predators. Mucuna holtonii (Fabaceae) has large seeds containing a toxic amino acid, L-dopa, and covered with a hard seed coat. Our study assessed the effectiveness of chemical and mechanical seed defences against vertebrate and invertebrate seed predators within Estación Biológica La Selva, Costa Rica. Pre-dispersal insect and fungus attack of M. holtonii seeds was low (95.7% of 1493 seeds were undamaged). Camera traps monitoring 90 marked M. holtonii seeds showed that the collared peccary (Pecari tajacu) consumed 98.6% of 69 removed seeds over 16 d. Field experiments involving 100 seeds with intact and 100 with opened seed coats found that only opened seeds had endosperm removed by Sericomyrmex amabilis ants (0.5–100% of endosperm removed). Shade-house experiments showed that seeds with high amounts of endosperm removed by ants resulted in low germination success and low seedling biomass production. Although M. holtonii seeds are rich in L-dopa, this compound is not an effective chemical defence against mammals that possess foregut fermentation. The seed coat of M. holtonii is an effective structural defence against invertebrate seed predators, preventing endosperm removal and enhancing seedling survival.

Precise estimation of root biomass is important for understanding carbon stocks and dynamics in tropical rain forests. However, limited information is available on individual root masses, especially large trees. We excavated 121 root systems of various species (78) and sizes (up to 116 cm in dbh), and estimated both above- and below-ground biomass in a lowland primary dipterocarp forest in the Pasoh Forest Reserve, Peninsular Malaysia. A tree census was conducted in four research plots (each 0.2 ha) and stand-level biomass was estimated. We examined relationships between tree size parameters and masses of coarse roots (roots ≥5 mm in diameter) and derived a dbh-based allometric equation. The amounts of coarse roots that were lost during excavation were corrected. Coarse-root biomass before and after correction for lost roots was estimated to be 63.8 and 82.7 Mg ha−1, indicating that significant amounts of roots (23%) were lost during the sampling. We also estimated the biomass of small root (<5 mm) by applying pipe-model theory. The estimate, 13.3 Mg ha−1, was similar to another estimate of small roots, 16.4 Mg ha−1, which was obtained directly by the soil-pit sampling method. Total below-ground (BGB) and above-ground biomass (AGB) was estimated to be 95.9 and 536 Mg ha−1, respectively. The biomass-partitioning ratio (BGB/AGB) was about 0.18. In conclusion, the dbh-based allometric equation for coarse roots developed in this study, which kept good linearity even including the data of larger trees, might be useful for evaluating below-ground carbon stocks in other stands of similar forest (old-growth dipterocarp) in South-East Asia.

Contrasting ecological conditions may affect the distribution, abundance and impact of parasites and predators throughout the ranges of hosts and prey. Such patterns are evident on the archipelagos of Hawaii and the Galapagos, which vary in their distribution and abundance of avian parasites within and across islands. Previous research has documented higher intensity of parasitic fly larvae (Philornis downsi) in nests of Darwin's finches on elevated islands of the Galapagos. Here we examine P. downsi intensity and predation in 71 nests of Darwin's small ground finch (Geospiza fuliginosa) on Floreana Island. We found significant differences in parasite intensity, nest predation and clutch size between the lowland (0–100 m) and highland (300–400 m) habitats. Lowland finch nests had few P. downsi parasites (mean of 8 per nest), high nest predation (44% of nests) and large clutch size (3.4). Highland finch nests showed the opposite pattern, with many P. downsi parasites (40 per nest), low nest predation (17%) and small clutch size (2.5). This study suggests that the impacts of an introduced parasite are limited by its niche requirements and resource availability within and across islands. Our findings also imply that the vulnerability of bird populations to introduced parasites and predators is linked with variation in life history strategies across habitats.

Where one or a few tree species reach local high abundance, different ecological factors may variously facilitate or hinder their regeneration. Plant pathogens are thought to be one of those possible agents which drive intraspecific density-dependent mortality of tree seedlings in tropical forests. Experimental evidence for this is scarce, however. In an African rain forest at Korup, we manipulated the density of recently established seedlings (~5–8 wk old; low vs. high-density) of two dominant species of contrasting recruitment potential, and altered their exposure to pathogens using a broad-spectrum fungicide. Seedling mortality of the abundantly recruiting subcanopy tree Oubanguia alata was strongly density-dependent after 7 mo, yet fungicide-treated seedlings had slightly higher mortality than controls. By contrast, seedling mortality of the poorly recruiting large canopy-emergent tree Microberlinia bisulcata was unaffected by density or fungicide. Ectomycorrhizal colonization of M. bisulcata was not affected by density or fungicide either. For O. alata, adverse effects of fungicide on its vesicular arbuscular mycorrhizas may have offset any possible benefit of pathogen removal. We tentatively conclude that fungal pathogens are not a likely major cause of density dependence in O. alata, or of early post-establishment mortality in M. bisulcata. They do not explain the latter's currently very low recruitment rate at Korup.

Despite the potential importance of temporal separation for the coexistence of competing species, no study has found significant segregation at the circadian level between jaguar (Panthera onca) and puma (Puma concolor) in sympatry. Using data from camera trap surveys (wet and dry seasons), we have evaluated the activity patterns of both species and their potential prey at four areas in the dry forest of the Bolivian Chaco. We tested if temporal separation existed between these two species, and if their activity was related to that of a particular prey. At most sites, activity patterns of jaguar and puma did not vary significantly between seasons, except for puma at one site. There were no differences between sexes for any cat species at any site. At three sites we found statistically significant differences in the activity patterns of jaguar and puma, as they showed a clear temporal segregation. None of them followed the activity patterns of any particular prey species across sites. The latter suggests that segregation is influenced by avoidance behaviour between the two felid species. Therefore, temporal separation may be an important behavioural factor promoting the coexistence of jaguar and puma in some areas of this dry forest.

Environmental factors influencing grass establishment and performance in tropical savannas are poorly understood, particularly in relation to disturbance. We describe a seed sowing experiment that examined the effects of fire regime, canopy cover and litter cover on the emergence, establishment, height and fecundity (seed production) of the regionally dominant annual grass Sorghum intrans in northern Australia. Establishment was significantly lower under the woody canopy compared with canopy gaps, and where seeds were sown on a layer of litter compared with bare soil. However, variation in fire regime had no significant effect on establishment or seed production. Additionally, a shade-house experiment was conducted to test the effects of litter on seedling emergence of S. intrans and six other grass species representative of the local flora (Pseudopogonatherum contortum, Sorghum plumosum, Chrysopogon latifolius, Eriachne triseta, Heteropogon triticeus and Alloteropsis semialata). All species showed reduced emergence when sown either above or below litter, compared with bare soil. Our results demonstrate the importance of the overstorey as a determinant of S. intrans abundance and savanna grass composition more generally, through its effect on establishment. The aversion of savanna grasses to litter (and S. intrans to canopy shading) supports the notion of savanna species being highly adapted to disturbance.

At Lamto, little is known about animal community responses to habitat variability resulting from fires and the mosaic pattern of the vegetation in general and in particular about that of termites which play key roles in this ecosystem. With a standardized method, data were collected on termites from four habitats differing in their vegetation cover and fire-history: annually burned savanna, savanna woodland, forest island and gallery forest. A range of environmental variables was measured and correlated with species abundances. The number of termite species collected in the savanna woodland was very close to that found in the gallery forest while the forest island was the richest habitat. The species richness of the savanna woodland and forest island seemed partly due to their heterogeneous and transitional vegetation structures and variable food resources. With regard to the fire-history of habitats, Connell's intermediate disturbance hypothesis offers an explanation for differences in the patterns of habitat-specific species richness. Variation in species abundances was significantly correlated with only two environmental variables (soil pH and woody plant species richness). The pH appeared as the most influential factor for fungus-growers while tree invasion in the savanna strongly reduces the abundance of grass-feeding species (e.g. Trinervitermes geminatus). Although not significantly correlated with species abundances, soil carbon showed a positive correlation with the dominant soil-feeder Basidentitermes potens. As for wood-feeders, they were not strongly correlated with woody plant species richness; this fact might be linked to their use for other sources of nourishment. Overall, it appears that habitat variability in the Lamto reserve contributes to the maintenance of different subsets of the termite community.

A honeydew-producing scale insect, Stigmacoccus garmilleri (Margarodidae), is associated with oak trees (Quercus spp.) in highland forests of Mexico. Although feeding by ants on scale-insect honeydew is more frequently documented in the literature, the honeydew produced by feeding instars of S. garmilleri is sufficient to provide nourishment for birds. This study elucidates bird use of honeydew in the tropical montane forests near Chiconquiaco, Veracruz, Mexico, and uncovers patterns in honeydew foraging. Over a 2-mo period, 40 trees harbouring scale insects, located in both forest and pasture areas, were intensely studied (160 h of bird-foraging observations along with quantitative measurements of honeydew production). Fifteen resident bird species and 18 migrant species were observed visiting observation trees. Approximately 72% of the resident bird species and 83% of the migrant bird species observed were recorded to forage on scale-insect honeydew. Audubon's warbler (Dendroica coronata auduboni) was the most active consumer and defender of the resource. Of 118 aggressive chases observed, only 9.65% occurred in forest observation trees, and 90.3% in pasture trees. Audubon's warbler demonstrated preferential defence and territorial patrolling of scale-insect honeydew in scattered pasture trees.

Ants (Hymenoptera: Formicidae) are important predators of herbivorous insects on plants (Rosumek et al. 2009). Ant removal or absence may result in negative indirect effects on plants, as herbivore abundance and herbivory increase and plant growth and reproduction decline (Rosumek et al. 2009, Schmitz et al. 2000). Ant presence on plants often results from a mutualistic interaction. For example, strong highly coevolved ant–plant mutualisms are found on myrmecophytic plants that house ants in domatia (specialized nesting sites). Weaker mutualistic associations are found with myrmecophilic plants that only offer extra-floral nectaries (EFNs) or food bodies to attract ants, or on other plants hosting honeydew-producing hemipterans (indirect ant–plant interactions) that mediate ant abundance (Hölldobler & Wilson 1990). However, in most cases, plants and arboreal ants form more passive associations, where ants nest in the natural cavities of branches or bark, or construct carton nests on plant substrates (Hölldobler & Wilson 1990) and the only reward plants offer these ants is the use of their substrates. In these situations the indirect effect of ants on plants is merely by chance, a byproduct of ant presence (byproduct association).

Disruption of ecosystems is one of the biggest threats posed by invasive species (Mack et al. 2000). Thus, one of the most important challenges is to understand the impact of exotic species on native species and habitats (e.g. Jones 2008). The probability that entire ‘invasive communities’ will develop increases as more species establish in new areas (Bourgeois et al. 2005). For example, introduced species may act in concert, facilitating one another's invasion, and increasing the likelihood of successful establishment, spread and impact. Simberloff & Von Holle (1999) introduced the term ‘invasional meltdown’ for this process, which has received widespread attention since (e.g. O'Dowd 2003, Richardson et al. 2000, Simberloff 2006). Positive interactions among introduced species are relatively common, but few have been studied in detail (Traveset & Richardson 2006). Examples include introduced insects and birds that pollinate and disperse exotic plants, thereby facilitating the spread of these species into non-invaded habitats (Goulson 2003, Mandon-Dalger et al. 2004, Simberloff & Von Holle 1999). From a more general ecological perspective, the study of interactions involving introduced and invasive species can contribute to our knowledge of ecological processes – for example, community assembly and indirect interactions.

The reproductive success of hummingbird-pollinated plants often depends on complex interactions between environmental conditions and pollinator biology (Navarro 1999, Stiles 1985, Wolf et al. 1976). The effect of environment on reproductive success of hummingbird-pollinated plants is particularly pronounced at high altitudes, where large daily fluctuations in temperature, relative humidity and solar radiation limit the effective time for photosynthesis (Cavieres et al. 2000) and affect foraging activity (Navarro 1999) and abundance of pollinators (Rahbek 1997). At high altitudes in the tropical cloud forests of Costa Rica these factors may have serious impacts on fruit production.